Mp3g15720



Description

Annotation

Database ID Description
FunFam G3DSA:3.80.10.10:FF:000041 LRR receptor-like serine/threonine-protein kinase ERECTA
Pfam PF00069 Protein kinase domain
FunFam G3DSA:1.10.510.10:FF:000287 probable LRR receptor-like serine/threonine-protein kinase RKF3
SMART SM00220 serkin_6
CDD cd14066 STKc_IRAK
PANTHER PTHR45974 RECEPTOR-LIKE PROTEIN 55
FunFam G3DSA:3.30.200.20:FF:000039 receptor-like protein kinase FERONIA
SUPERFAMILY SSF52058 L domain-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF00560 Leucine Rich Repeat
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0617 Ras suppressor protein (contains leucine-rich repeats); C-term missing; [T]
MapolyID Mapoly0004s0100 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_URK-Pp-1a Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g15720.1 chr3:16211342..16221349 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g15720.2 chr3:16211342..16221349 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g15720.3 chr3:16211342..16221349 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g15720.4 chr3:16211342..16221349 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g15720 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g15720 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.