Mp3g17990



Description

Annotation

Database ID Description
FunFam G3DSA:3.30.200.20:FF:000542 Receptor-like serine/threonine-protein kinase At4g25390
Coils Coil Coil
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
SMART SM00220 serkin_6
Pfam PF00069 Protein kinase domain
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50011 Protein kinase domain profile.
FunFam G3DSA:1.10.510.10:FF:001023 Os07g0541700 protein
PANTHER PTHR46821 OS07G0586332 PROTEIN
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF07714 Protein tyrosine and serine/threonine kinase
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
KOG KOG1187 Serine/threonine protein kinase; C-term missing; [T]
KOG KOG1187 Serine/threonine protein kinase; N-term missing; [T]
KOG KOG0151 Predicted splicing regulator, contains RRM, SWAP and RPR domains; N-term missing; [R]
KOG KOG4270 GTPase-activator protein; N-term missing; [T]
MapolyID Mapoly0140s0042 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RLCK-XI Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g17990.1 chr3:19357139..19363172 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g17990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g17990 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.