Mp3g22160



Description

Annotation

Database ID Description
PANTHER PTHR21562 NOTUM-RELATED
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
Pfam PF03283 Pectinacetylesterase
KEGG K19882 O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98]
KOG KOG4287 Pectin acetylesterase and similar proteins; [M]
MapolyID Mapoly0089s0001 -
GO GO:0016787 hydrolase activity
GO GO:0071555 cell wall organization
GO GO:0009505 plant-type cell wall
GO GO:0052793 pectin acetylesterase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpCE13.2 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g22160.1 chr3:24727023..24731149 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g22160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g22160 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.