Mp3g23380



Description

Annotation

Database ID Description
PANTHER PTHR31155 ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED
CDD cd01050 Acyl_ACP_Desat
FunFam G3DSA:1.10.620.20:FF:000002 Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
Gene3D G3DSA:1.10.620.20 Ribonucleotide Reductase, subunit A
SUPERFAMILY SSF47240 Ferritin-like
PIRSF PIRSF000346 Dlt9_acylACP_des
Pfam PF03405 Fatty acid desaturase
KEGG K03921 acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
MapolyID Mapoly0024s0114 -
GO GO:0045300 stearoyl-[ACP] desaturase activity
GO GO:0006631 fatty acid metabolic process
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpFAD9 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23380.1 chr3:26539162..26543772 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g23380.2 chr3:26539156..26543767 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g23380 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g23380 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.