Mp4g00620



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.980 -
ProSiteProfiles PS50075 Carrier protein (CP) domain profile.
Pfam PF07993 Male sterility protein
PANTHER PTHR44845 CARRIER DOMAIN-CONTAINING PROTEIN
Gene3D G3DSA:3.30.300.30 -
SMART SM00823 Phosphopantetheine attachment site
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like
CDD cd05930 A_NRPS
NCBIfam TIGR01746 thioester reductase domain
NCBIfam TIGR01733 amino acid adenylation domain
Pfam PF13193 AMP-binding enzyme C-terminal domain
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3
Pfam PF00501 AMP-binding enzyme
CDD cd05235 SDR_e1
Pfam PF00550 Phosphopantetheine attachment site
ProSitePatterns PS00455 Putative AMP-binding domain signature.
SUPERFAMILY SSF47336 ACP-like
Gene3D G3DSA:1.10.1200.10 -
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains
Gene3D G3DSA:3.40.50.720 -
KOG KOG1176 Acyl-CoA synthetase; [I]
KOG KOG1221 Acyl-CoA reductase; C-term missing; [I]
MapolyID Mapoly0066s0079 -
GO GO:0031177 phosphopantetheine binding

Nomenclature

Gene symbol Product Transcript ID Status
MpACOS15 Acyl-CoA synthase, Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g00620.1 chr4:887032..890118 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g00620 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g00620 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.