Mp4g01430



Description

Annotation

Database ID Description
PRINTS PR00019 Leucine-rich repeat signature
PANTHER PTHR45974 RECEPTOR-LIKE PROTEIN 55
Pfam PF13855 Leucine rich repeat
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS50011 Protein kinase domain profile.
SMART SM00369 LRR_typ_2
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSiteProfiles PS51450 Leucine-rich repeat profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF07714 Protein tyrosine and serine/threonine kinase
Pfam PF00560 Leucine Rich Repeat
SUPERFAMILY SSF52047 RNI-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Pfam PF08263 Leucine rich repeat N-terminal domain
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0098s0059 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_WAK_LRK10L-10 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01430.1 chr4:1663976..1668778 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g01430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g01430 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.