Mp4g06560



Description

Annotation

Database ID Description
SUPERFAMILY SSF49590 PHL pollen allergen
CDD cd22274 DPBB_EXPA_N
Pfam PF03330 Lytic transglycolase
PRINTS PR01226 Expansin signature
ProSiteProfiles PS50843 Expansin, Cellulose-binding-like domain profile.
ProSiteProfiles PS50842 Expansin, family-45 endoglucanase-like domain profile.
Pfam PF01357 Expansin C-terminal domain
PANTHER PTHR31867 EXPANSIN-A15
Gene3D G3DSA:2.60.40.760 -
Gene3D G3DSA:2.40.40.10 -
SMART SM00837 dpbb_1
PRINTS PR01225 Expansin/Lol pI family signature
SUPERFAMILY SSF50685 Barwin-like endoglucanases
KEGG K20628 expansin
MapolyID Mapoly0125s0001 -
GO GO:0005576 extracellular region
GO GO:0009664 plant-type cell wall organization

Nomenclature

Gene symbol Product Transcript ID Status
MpExpansin32 Cell wall related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Cell wall related protein (from nomenclature)

0 core 1 peripheral

Hong, S.-F., et al. (2024) · Plant & Cell Physiology  research experimental comparator
Expansin (Mp4g06560); auxin-response target examined.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g06560.1 chr4:8800628..8804016 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g06560.2 chr4:8800628..8803382 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.