Mp4g19650



Description

Annotation

Database ID Description
SMART SM00353 finulus
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:4.10.280.10 -
CDD cd11393 bHLH_AtbHLH_like
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
Pfam PF00010 Helix-loop-helix DNA-binding domain
PANTHER PTHR46772 BHLH DOMAIN-CONTAINING PROTEIN
CDD cd04873 ACT_UUR-ACR-like
KOG KOG3561 Aryl-hydrocarbon receptor nuclear translocator; C-term missing; [K]
MapolyID Mapoly0126s0029 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0009960 endosperm development
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH38 transcription factor, bHLH Published
MpZOU1 basic helix loop helix transcription factor Published

Associated Literature (AI-based literature mining, Beta-version)

ZHOUPI ortholog (MpbHLH38; Mp4g19650); recruited in the convergent evolution of water-conducting cells, promoting cell-wall reinforcement and programmed cell death. OE analyzed.

1 core 0 peripheral

Lu, Y.-T., et al. (2024) · Current Biology  research experimental subject
ZHOUPI ortholog (MpbHLH38; Mp4g19650); recruited in the convergent evolution of water-conducting cells, promoting cell-wall reinforcement and programmed cell death. OE analyzed.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g19650.1 chr4:26466047..26472403 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.