Mp5g20530



Description

Annotation

Database ID Description
Coils Coil Coil
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:3.30.160.60:FF:000131 protein indeterminate-domain 5, chloroplastic-like
PANTHER PTHR10593 SERINE/THREONINE-PROTEIN KINASE RIO
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
Pfam PF00096 Zinc finger, C2H2 type
SMART SM00355 c2h2final6
FunFam G3DSA:3.30.160.60:FF:000554 protein indeterminate-domain 12-like
KEGG K25870 zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
KOG KOG2462 C2H2-type Zn-finger protein; N-term missing; [K]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
MapolyID Mapoly0058s0031 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus

Nomenclature

Gene symbol Product Transcript ID Status
MpIDDL3 transcription factor, IDD-related Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g20530.1 chr5:26007727..26013199 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.