Mp7g07550



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
PANTHER PTHR46352 PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
FunFam G3DSA:3.30.160.60:FF:000100 Zinc finger 45-like
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
SMART SM00355 c2h2final6
Pfam PF12874 Zinc-finger of C2H2 type
KOG KOG2462 C2H2-type Zn-finger protein; N-term missing; [K]
MapolyID Mapoly0076s0039 -
GO GO:0010044 response to aluminum ion
GO GO:0010447 response to acidic pH

Nomenclature

Gene symbol Product Transcript ID Status
MpIDDL4 transcription factor, IDD-related Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, IDD-related (from nomenclature)

0 core 1 peripheral

Liu, W., et al. (2024a) · Cell Reports  research experimental background
Indeterminate domain (IDD) protein gene; examined in MpANT meristem study (Fig 2B).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g07550.1 chr7:10439429..10444604 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.