Mp7g12080



Description

Annotation

Database ID Description
SUPERFAMILY SSF81324 Voltage-gated potassium channels
Gene3D G3DSA:1.20.120.350 -
Pfam PF03493 Calcium-activated BK potassium channel alpha subunit
PANTHER PTHR10027 CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
Pfam PF00520 Ion transport protein
Gene3D G3DSA:1.10.287.70 -
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.40.50.720 -
PRINTS PR01449 Calcium-activated BK potassium channel alpha subunit signature
Pfam PF21014 Ca2+-activated K+ channel Slowpoke, TrkA_C like domain
KOG KOG1420 Ca2+-activated K+ channel Slowpoke, alpha subunit; [PT]
MapolyID Mapoly0003s0221 -
GO GO:0055085 transmembrane transport
GO GO:0005216 monoatomic ion channel activity
GO GO:0006813 potassium ion transport
GO GO:0005267 potassium channel activity
GO GO:0071805 potassium ion transmembrane transport
GO GO:0006811 monoatomic ion transport
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpBK2A BK channel Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g12080.1 chr7:15318253..15336791 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g12080.2 chr7:15318253..15336335 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g12080.3 chr7:15326285..15336335 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g12080 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g12080 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.