Mp8g00970



Description

Annotation

Database ID Description
Pfam PF09737 De-etiolated protein 1 Det1
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR13374 DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
KEGG K10571 de-etiolated-1
KOG KOG2558 Negative regulator of histones; N-term missing; [K]
KOG KOG2558 Negative regulator of histones; C-term missing; [K]
MapolyID Mapoly0064s0101 -
GO GO:0005634 nucleus
GO GO:0031461 cullin-RING ubiquitin ligase complex
GO GO:0016567 protein ubiquitination
GO GO:0031625 ubiquitin protein ligase binding
GO GO:1990756 ubiquitin-like ligase-substrate adaptor activity
GO GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpDET1 A subunit of CDD complex Published

Associated Literature (AI-based literature mining, Beta-version)

DE-ETIOLATED1 (Mp8g00970); plays a role in the circadian clock of M. polymorpha. Mpdet1 alters clock-output gene rhythms; itself a rhythmically expressed clock-associated gene.

1 core 1 peripheral

Lagercrantz, U., et al. (2021) · New Phytologist  research experimental subject
DE-ETIOLATED1 (Mp8g00970); plays a role in the circadian clock of M. polymorpha. Mpdet1 alters clock-output gene rhythms; itself a rhythmically expressed clock-associated gene.
Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced DET1 (DE-ETIOLATED-1), photomorphogenic component (annotation).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g00970.1 chr8:1158923..1165813 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.