Mp1g03950



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.50.10 -
Pfam PF00320 GATA zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR45658 GATA TRANSCRIPTION FACTOR
CDD cd00202 ZnF_GATA
SMART SM00401 GATA_3
PIRSF PIRSF016992 Txn_fac_GATA_plant
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
FunFam G3DSA:3.30.50.10:FF:000018 GATA transcription factor
ProSitePatterns PS00344 GATA-type zinc finger domain.
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
KOG KOG1601 GATA-4/5/6 transcription factors; C-term missing; [K]
MapolyID Mapoly0005s0212 -
GO GO:0043565 sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0008270 zinc ion binding
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0045893 positive regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA2 transcription factor, GATA Published

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha C2C2-GATA TF assayed by ampDAP-seq; yielded a GATA-type TFBM (GATC).

1 core 1 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research experimental subject
M. polymorpha C2C2-GATA TF assayed by ampDAP-seq; yielded a GATA-type TFBM (GATC).
Yelina, N. E., et al. (2024) · Cell Reports  research experimental background
MpGATA2 GATA TF; chloroplast development

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03950.1 chr1:4249916..4254317 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.