Mp1g07140



Description

Annotation

Database ID Description
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
SMART SM00320 WD40_4
Pfam PF07569 TUP1-like enhancer of split
Pfam PF00400 WD domain, G-beta repeat
Gene3D G3DSA:2.130.10.10 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF50978 WD40 repeat-like
PANTHER PTHR13831 MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
CDD cd00200 WD40
KEGG K11293 protein HIRA/HIR1
KOG KOG0973 Histone transcription regulator HIRA, WD repeat superfamily; [DK]
MapolyID Mapoly0043s0107 -
GO GO:0005634 nucleus
GO GO:0031491 nucleosome binding
GO GO:0006325 chromatin organization
GO GO:0006338 chromatin remodeling
GO GO:0000417 HIR complex
GO GO:0006351 DNA-templated transcription
GO GO:0006336 chromatin organization
GO GO:0005515 protein binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000790 chromatin

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Locus ID for MpSGF1, listed in the candidate peptide gene table.

0 core 1 peripheral

Kobayashi, H., et al. (2023) · Frontiers in Plant Science  research sequence background
Locus ID for MpSGF1, listed in the candidate peptide gene table.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07140.1 chr1:7641037..7646323 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.