Mp1g09420



Description

Annotation

Database ID Description
CDD cd00167 SANT
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.10.10.60:FF:000001 MYB-related transcription factor
PANTHER PTHR10641 MYB FAMILY TRANSCRIPTION FACTOR
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000349 Transcription factor MYB39
SMART SM00717 sant
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0096s0058 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB17 transcription factor, MYB Published
MpSBG9 transcription factor, MYB Provisional

Associated Literature (AI-based literature mining, Beta-version)

Subgroup-9 MIXTA-type R2R3-MYB (=MpMIXTA/MpR2R3-MYB17; Mp1g09420); regulates cuticle biosynthesis. Mpsbg9 mutants alter cuticle-related gene expression; MIXTA-MYB lineage implicated in early cuticle evolution and land colonization.

2 core 1 peripheral

Xu, B., et al. (2021) · New Phytologist  research experimental subject
Subgroup-9 MIXTA-type R2R3-MYB (=MpMIXTA/MpR2R3-MYB17; Mp1g09420); regulates cuticle biosynthesis. Mpsbg9 mutants alter cuticle-related gene expression; MIXTA-MYB lineage implicated in early cuticle evolution and land colonization.
Tanaka, H., et al. (2018) · Plant Biotchnology  research experimental subject
Salinity-upregulated R2R3-MYB transcription factor (homolog of Arabidopsis ATMIXTA/MYB16), identified by RNA-Seq (logFC 1.12, FDR 0.0115). qRT-PCR confirmed the RNA-Seq expression pattern.
Althoff, F., et al. (2022) · Fronteirs in Plant Science  research citation comparator
MYB TF regulating cutin formation

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09420.1 chr1:10016916..10020178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g09420.2 chr1:10016916..10020178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.