| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00096 | Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 |
| FunFam | G3DSA:3.40.640.10:FF:000050 | Serine hydroxymethyltransferase |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases |
| PIRSF | PIRSF000412 | SHMT |
| Pfam | PF00464 | Serine hydroxymethyltransferase |
| PANTHER | PTHR11680 | SERINE HYDROXYMETHYLTRANSFERASE |
| Hamap | MF_00051 | Serine hydroxymethyltransferase [glyA]. |
| FunFam | G3DSA:3.90.1150.10:FF:000005 | Serine hydroxymethyltransferase |
| CDD | cd00378 | SHMT |
| Gene3D | G3DSA:3.40.640.10 | - |
| KEGG | K00600 | glycine hydroxymethyltransferase [EC:2.1.2.1] |
| KOG | KOG2467 | Glycine/serine hydroxymethyltransferase; [E] |
| MapolyID | Mapoly0096s0018 | - |
| GO | GO:0006565 | L-serine catabolic process |
| GO | GO:0046655 | folic acid metabolic process |
| GO | GO:0006730 | one-carbon metabolic process |
| GO | GO:0070905 | serine binding |
| GO | GO:0035999 | tetrahydrofolate interconversion |
| GO | GO:0008270 | zinc ion binding |
| GO | GO:0050897 | cobalt ion binding |
| GO | GO:0004372 | glycine hydroxymethyltransferase activity |
| GO | GO:0046653 | tetrahydrofolate metabolic process |
| GO | GO:0005737 | cytoplasm |
| GO | GO:0030170 | pyridoxal phosphate binding |
| GO | GO:0019264 | glycine biosynthetic process from serine |
No gene symbols are registered for this gene.
Serine hydroxymethyltransferase of the glycolate pathway; measured by qRT-PCR and gradually reduced in darkness, cited as an alternative serine route.
0 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g09830.1 CTTCTCCTTC CTCGTTCGAC CGCGGCTCGA GCGGAGGACG ATTCGAAGAG GAAGAAGCAA GAACGAAAGC CTCGTAGGCC TCTCTTAGGT GTGAAGCGAG GTCGCGTCGC TATGGGATCC GTGAAGGAAT GGGGCAACAC GAGCCTCGAG GAGGCGGACG ACGAGATTTT CTACCTGGTA GAGCAGGAGA AAATGCGCCA GTACAAGGGC ATTGAGCTCA TTGCGTCCGA GAATTTCACC TCGCAAGCTG TGATCGAAGC TCTGGGTAGC GCCCTGACCA ACAAGTACTC CGAGGGTCTC CCCGGCGCTC GTTATTATGG AGGTAATGAG TTCGTGGACC AGATCGAGAA CCTGTGCAGA GCGCGAGCCT TGACGGCGTT CCACTGCGAT CCTGCGAAAT GGGGTGTCAA CGTCCAGCCT TACTCTGGAA GCCCTGCCAA TTTTGCAGTG TACACCGCTC TGTTGAATCC CCATGATCGC ATTATGGGCT TGGATCTGCC CTCAGGTGGT CACTTGACCC ACGGTTACTA CACAGCCCAT GGAAAGAAGA TCTCCGCCAC ATCTATTTAC TTTGAAAGTC TCCCTTACAA GGTCGACTTT GCCACTGGCT ACATCGACTA CGCAAGGTTG GAGGAGAAGG CTCTGGACTA CAGACCGAAA TTGATCATTT CTGGAGGCAG TGCCTATCCT CGTGATTGGG ACTACGCCCG GCTTCGCACC ATTGCTGACA AATGTGGCGC CATGCTCATG TGCGACATGG CCCATTTCAG CGGTCTCGTG GCTGCTCAGG TACCTTACTA TCTCGCTGCT CTGTGCGCAT TTCAACGTGT TCTCGTAGAA TGATCCAAGC ATAGCATTCT TATTCCAAAG CCTAGTCAAA CTTTGGAAAT ATCTTGCGTA GGATCTATGC GACGCTTAGC TGAGAAAGAT CGATACCTTT CCTCTGATGT TTTCTTGACA CACGTTCAGG AGGTTAACAA CCCGTTCGAG TACTGCGACG TGGTGACCAC CACCACCCAC AAGAGTTTGA GAGGTCCTCG AGCGGGTATG ATTTTCTACA GAAAGGGACC CAAGCCCGCC AAGAAAGGAC AGATCGGAGA AGTGAACTAT GATTATGAGG ACAAGATCAA CTTTGCAGTC TTCCCTTCAT TGCAGGGTGG ACCTCACAAC CATCAAATTG CTGCTCTTGC CGTGGCTTTG AAGCAGGCTA ACACTCCCAT GTTCAAGGAG TACGCCAAGC AAGTAAAGGC GAATGCCGCC GCCATCGGTG CTGCTTTGAT GAAGAAGGGC TACAAGATGG TGACTGATGG AACCGATAAT CATTTAGTGC TTTGGGATTT GAGACCACTT GGACTCACTG GTAAGTTCAC TCTGACCTCT TGCTCATATA GCTCCCGACC ATGTAATGGA CATGGGTTTG GCCAGTCTTG CTCCAGTAGA GCTATTCCTG TCTGATCAAA GATTTCACGA TGCCTATGCT TGTTTCGAAT GCTCTGACAT TATCTGGCAT TTCCGGCCCG CAGGAAACAA AGTTGAAAGA GTTTGCGAGT TGGCTCACAT TACTTTGAAC AAGAATGCTG TTTTTGGTGA TAGCAGTGCT CTCGCACCTG GTGGAGTTAG AATTGGTAAG TAGAATGCTT GTCTGGAGAC CTTTATGTTT CCTCAGCTGT CACGGAATGG CCTGCAGCAG GTCCAGTTAG CTGCCCCGAA TGTCGATCGC GATTGACGGG AGATCTGCTC TTCAAGAAAA AAGAATGATT GAGTAGCTTC ACGGGCAATT TGTTTTTCAT GAGAGGCCTT CGATGATTGC ATCTACTGAC AATAGGTTCG ACGAGATTGA TTTTTATGGA TTTGTAGTTT TTTGTGGGAG TCGGCGGAGA TGAAGAAGTA TTAACATTAC CATGATGGGG AATTATCCAG GTGCACCCGC TATGACTTCA AGGGGTCTGA AGGAGAAGGA TTTCGAGCAG ATAGCTGATT TTTTGGAACA GGCAGTGAAC ATTACGCTCT CTGTACAGAA AGAGTATGGA AAGCTGCTAA AAGACTTCAA CAAGGGCTTG GTGGACAACA AAGAGATTGC TGCATTGAAG GAAGCTGTCG AGAAGTTTGC TGCGTCGTAC GATATGCCTG GATTCGATGT AAACGCAATC AAGATGCCTG TAAGCGCCTG ATTGTCAACC AATGATACAG AAATTTTCTC TAGGAAGTCA ATTCTCGTCT AGAAAAGTTT CTTAGGCAAT CATCTTTCAT TCTTTCATCT AATTATAAAA GCACTTTTAC AGAAGTTCTC TTGTCAGACT CGGCAGTGCA TGTCCTTTGT TCGTCTTGTC GGGTGTGTTC ATGGGCAACC CAGGATGTCA AGTTGTCTTA TAATTTACTG CTCCATCTGG TTACTCACTC TGGCCGTCTG GCCTTCGATT GCGTGACCTG AAAATGCAAT GAATGAAACA GAATGCAGAG AAATGCTCTA AGGCACAGAA TGATGAATGA CGCCAAATTT TTCGTTTTAG AAATGAAAAA TCTGAAAAAT AGATGGAAAT CTCTGTAAAG ATGAACCAGA ATCTGAAAAA TCTCGGGTGG TGGAGACCAA GCTACCGTGG TCTGAATGAG AAAACTTAGT AGTAGATCTG CTGAAAGGAT GGCGGGCTCC GTCGGCTTTT GAGTATGGTC TTTCAAGAGG TGTGGCTCTG ATTGCATGCT CGATTTGTTA CCGGGTGACC GAGAAGTTGA TGTGCAGAGC AGTGTGAACT TACCTTCTGT CTATGACTAG ATACCAAGCT ATGTAGTTTG CGATACCACA ATCATCCACA CAATTAAGAA ACGTCTGCAC ATCATCACTT TTCCATAGAT CAGAGTTCTA TGTTCCTGCA TGTTCAAACA TGTACAGTTC TTGTTACATG CTTGCACAGT ATAATGCATA TACATCTAGT CAGACTACCT CATACATATT CTATATGTAT GTAAACCCCC TAATATGGGA CGCCTTTAAC GAAGGATGGG CAGAACTCAT CAACTGTATA AAGAACCAAA CAAAGGGAAT ACCAGAG |
mRNA UTR + CDS |
| >Mp1g09830.1 CTTCTCCTTC CTCGTTCGAC CGCGGCTCGA GCGGAGGACG ATTCGAAGAG GAAGAAGCAA GAACGAAAGC CTCGTAGGCC TCTCTTAGGT GTGAAGCGAG GTCGCGTCGC TATGGGATCC GTGAAGGAAT GGGGCAACAC GAGCCTCGAG GAGGCGGACG ACGAGATTTT CTACCTGGTA GAGCAGGAGA AAATGCGCCA GTACAAGGGC ATTGAGCTCA TTGCGTCCGA GAATTTCACC TCGCAAGCTG TGATCGAAGC TCTGGGTAGC GCCCTGACCA ACAAGTACTC CGAGGGTCTC CCCGGCGCTC GTTATTATGG AGGTAATGAG TTCGTGGACC AGATCGAGAA CCTGTGCAGA GCGCGAGCCT TGACGGCGTT CCACTGCGAT CCTGCGAAAT GGGGTGTCAA CGTCCAGCCT TACTCTGGAA GCCCTGCCAA TTTTGCAGTG TACACCGCTC TGTTGAATCC CCATGATCGC ATTATGGGCT TGGATCTGCC CTCAGGTGGT CACTTGACCC ACGGTTACTA CACAGCCCAT GGAAAGAAGA TCTCCGCCAC ATCTATTTAC TTTGAAAGTC TCCCTTACAA GGTCGACTTT GCCACTGGCT ACATCGACTA CGCAAGGTTG GAGGAGAAGG CTCTGGACTA CAGACCGAAA TTGATCATTT CTGGAGGCAG TGCCTATCCT CGTGATTGGG ACTACGCCCG GCTTCGCACC ATTGCTGACA AATGTGGCGC CATGCTCATG TGCGACATGG CCCATTTCAG CGGTCTCGTG GCTGCTCAGG AGGTTAACAA CCCGTTCGAG TACTGCGACG TGGTGACCAC CACCACCCAC AAGAGTTTGA GAGGTCCTCG AGCGGGTATG ATTTTCTACA GAAAGGGACC CAAGCCCGCC AAGAAAGGAC AGATCGGAGA AGTGAACTAT GATTATGAGG ACAAGATCAA CTTTGCAGTC TTCCCTTCAT TGCAGGGTGG ACCTCACAAC CATCAAATTG CTGCTCTTGC CGTGGCTTTG AAGCAGGCTA ACACTCCCAT GTTCAAGGAG TACGCCAAGC AAGTAAAGGC GAATGCCGCC GCCATCGGTG CTGCTTTGAT GAAGAAGGGC TACAAGATGG TGACTGATGG AACCGATAAT CATTTAGTGC TTTGGGATTT GAGACCACTT GGACTCACTG GAAACAAAGT TGAAAGAGTT TGCGAGTTGG CTCACATTAC TTTGAACAAG AATGCTGTTT TTGGTGATAG CAGTGCTCTC GCACCTGGTG GAGTTAGAAT TGGTGCACCC GCTATGACTT CAAGGGGTCT GAAGGAGAAG GATTTCGAGC AGATAGCTGA TTTTTTGGAA CAGGCAGTGA ACATTACGCT CTCTGTACAG AAAGAGTATG GAAAGCTGCT AAAAGACTTC AACAAGGGCT TGGTGGACAA CAAAGAGATT GCTGCATTGA AGGAAGCTGT CGAGAAGTTT GCTGCGTCGT ACGATATGCC TGGATTCGAT GTAAACGCAA TCAAGATGCC TGTAAGCGCC TGATTGTCAA CCAATGATAC AGAAATTTTC TCTAGGAAGT CAATTCTCGT CTAGAAAAGT TTCTTAGGCA ATCATCTTTC ATTCTTTCAT CTAATTATAA AAGCACTTTT ACAGAAGTTC TCTTGTCAGA CTCGGCAGTG CATGTCCTTT GTTCGTCTTG TCGGGTGTGT TCATGGGCAA CCCAGGATGT CAAGTTGTCT TATAATTTAC TGCTCCATCT GGTTACTCAC TCTGGCCGTC TGGCCTTCGA TTGCGTGACC TGAAAATGCA ATGAATGAAA CAGAATGCAG AGAAATGCTC TAAGGCACAG AATGATGAAT GACGCCAAAT TTTTCGTTTT AGAAATGAAA AATCTGAAAA ATAGATGGAA ATCTCTGTAA AGATGAACCA GAATCTGAAA AATCTCGGGT GGTGGAGACC AAGCTACCGT GGTCTGAATG AGAAAACTTA GTAGTAGATC TGCTGAAAGG ATGGCGGGCT CCGTCGGCTT TTGAGTATGG TCTTTCAAGA GGTGTGGCTC TGATTGCATG CTCGATTTGT TACCGGGTGA CCGAGAAGTT GATGTGCAGA GCAGTGTGAA CTTACCTTCT GTCTATGACT AGATACCAAG CTATGTAGTT TGCGATACCA CAATCATCCA CACAATTAAG AAACGTCTGC ACATCATCAC TTTTCCATAG ATCAGAGTTC TATGTTCCTG CATGTTCAAA CATGTACAGT TCTTGTTACA TGCTTGCACA GTATAATGCA TATACATCTA GTCAGACTAC CTCATACATA TTCTATATGT ATGTAAACCC CCTAATATGG GACGCCTTTA ACGAAGGATG GGCAGAACTC ATCAACTGTA TAAAGAACCA AACAAAGGGA ATACCAGAG |
CDS |
| >Mp1g09830.1 ATGGGATCCG TGAAGGAATG GGGCAACACG AGCCTCGAGG AGGCGGACGA CGAGATTTTC TACCTGGTAG AGCAGGAGAA AATGCGCCAG TACAAGGGCA TTGAGCTCAT TGCGTCCGAG AATTTCACCT CGCAAGCTGT GATCGAAGCT CTGGGTAGCG CCCTGACCAA CAAGTACTCC GAGGGTCTCC CCGGCGCTCG TTATTATGGA GGTAATGAGT TCGTGGACCA GATCGAGAAC CTGTGCAGAG CGCGAGCCTT GACGGCGTTC CACTGCGATC CTGCGAAATG GGGTGTCAAC GTCCAGCCTT ACTCTGGAAG CCCTGCCAAT TTTGCAGTGT ACACCGCTCT GTTGAATCCC CATGATCGCA TTATGGGCTT GGATCTGCCC TCAGGTGGTC ACTTGACCCA CGGTTACTAC ACAGCCCATG GAAAGAAGAT CTCCGCCACA TCTATTTACT TTGAAAGTCT CCCTTACAAG GTCGACTTTG CCACTGGCTA CATCGACTAC GCAAGGTTGG AGGAGAAGGC TCTGGACTAC AGACCGAAAT TGATCATTTC TGGAGGCAGT GCCTATCCTC GTGATTGGGA CTACGCCCGG CTTCGCACCA TTGCTGACAA ATGTGGCGCC ATGCTCATGT GCGACATGGC CCATTTCAGC GGTCTCGTGG CTGCTCAGGA GGTTAACAAC CCGTTCGAGT ACTGCGACGT GGTGACCACC ACCACCCACA AGAGTTTGAG AGGTCCTCGA GCGGGTATGA TTTTCTACAG AAAGGGACCC AAGCCCGCCA AGAAAGGACA GATCGGAGAA GTGAACTATG ATTATGAGGA CAAGATCAAC TTTGCAGTCT TCCCTTCATT GCAGGGTGGA CCTCACAACC ATCAAATTGC TGCTCTTGCC GTGGCTTTGA AGCAGGCTAA CACTCCCATG TTCAAGGAGT ACGCCAAGCA AGTAAAGGCG AATGCCGCCG CCATCGGTGC TGCTTTGATG AAGAAGGGCT ACAAGATGGT GACTGATGGA ACCGATAATC ATTTAGTGCT TTGGGATTTG AGACCACTTG GACTCACTGG AAACAAAGTT GAAAGAGTTT GCGAGTTGGC TCACATTACT TTGAACAAGA ATGCTGTTTT TGGTGATAGC AGTGCTCTCG CACCTGGTGG AGTTAGAATT GGTGCACCCG CTATGACTTC AAGGGGTCTG AAGGAGAAGG ATTTCGAGCA GATAGCTGAT TTTTTGGAAC AGGCAGTGAA CATTACGCTC TCTGTACAGA AAGAGTATGG AAAGCTGCTA AAAGACTTCA ACAAGGGCTT GGTGGACAAC AAAGAGATTG CTGCATTGAA GGAAGCTGTC GAGAAGTTTG CTGCGTCGTA CGATATGCCT GGATTCGATG TAAACGCAAT CAAGATGCCT GTAAGCGCCT GA |
Protein |
| >Mp1g09830.1 MGSVKEWGNT SLEEADDEIF YLVEQEKMRQ YKGIELIASE NFTSQAVIEA LGSALTNKYS EGLPGARYYG GNEFVDQIEN LCRARALTAF HCDPAKWGVN VQPYSGSPAN FAVYTALLNP HDRIMGLDLP SGGHLTHGYY TAHGKKISAT SIYFESLPYK VDFATGYIDY ARLEEKALDY RPKLIISGGS AYPRDWDYAR LRTIADKCGA MLMCDMAHFS GLVAAQEVNN PFEYCDVVTT TTHKSLRGPR AGMIFYRKGP KPAKKGQIGE VNYDYEDKIN FAVFPSLQGG PHNHQIAALA VALKQANTPM FKEYAKQVKA NAAAIGAALM KKGYKMVTDG TDNHLVLWDL RPLGLTGNKV ERVCELAHIT LNKNAVFGDS SALAPGGVRI GAPAMTSRGL KEKDFEQIAD FLEQAVNITL SVQKEYGKLL KDFNKGLVDN KEIAALKEAV EKFAASYDMP GFDVNAIKMP VSA |