Mp1g19210



Description

Annotation

Database ID Description
Coils Coil Coil
PANTHER PTHR16223 TRANSCRIPTION FACTOR BHLH83-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00353 finulus
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
FunFam G3DSA:4.10.280.10:FF:000021 Transcription factor bHLH130 family
Pfam PF00010 Helix-loop-helix DNA-binding domain
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
CDD cd11393 bHLH_AtbHLH_like
Gene3D G3DSA:4.10.280.10 -
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID Mapoly0001s0259 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH27 transcription factor, bHLH Published

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha bHLH TF tested by ampDAP-seq; yielded TFBM C(A/C)ACTTG (E-box-like), supporting bHLH motif conservation.

1 core 0 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research experimental subject
M. polymorpha bHLH TF tested by ampDAP-seq; yielded TFBM C(A/C)ACTTG (E-box-like), supporting bHLH motif conservation.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19210.1 chr1:20148750..20153980 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.2 chr1:20149337..20153985 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.3 chr1:20149524..20153963 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.4 chr1:20149523..20153959 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.