Mp1g28830



Description

Annotation

Database ID Description
Gene3D G3DSA:2.170.15.10 Proaerolysin, chain A, domain 3
Gene3D G3DSA:2.80.10.50 -
SUPERFAMILY SSF56973 Aerolisin/ETX pore-forming domain
CDD cd20215 PFM_LSL-like
PANTHER PTHR39244 NATTERIN-4
SUPERFAMILY SSF50370 Ricin B-like lectins
Pfam PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Unannotated gene; listed in Table 1 among DEGs oppositely regulated by loss and induction of MpKAN.

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Unannotated gene; listed in Table 1 among DEGs oppositely regulated by loss and induction of MpKAN.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g28830.1 chr1:30130748..30132323 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.