Mp2g13020



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.60 -
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
PANTHER PTHR44042 DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
ProSiteProfiles PS51293 SANT domain profile.
FunFam G3DSA:1.10.10.60:FF:000154 Transcription factor SRM1
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000009 transcription factor MYB1R1
SMART SM00717 sant
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
Pfam PF00249 Myb-like DNA-binding domain
KOG KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; C-term missing; [O]
KOG KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230; N-term missing; [K]
MapolyID Mapoly0026s0070 -
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRR-MYB2 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

RR-type MYB-related TF; controls chloroplast biogenesis; Mprr-myb2 perturbs petE expression.

1 core 2 peripheral

Frangedakis, E., et al. (2024) · Cell  research experimental subject
RR-type MYB-related TF; controls chloroplast biogenesis; Mprr-myb2 perturbs petE expression.
Kushwaha A, Singh S, Zheng BS, Tripathi DK, Gupta R, Singh VP. (2025) · Journal of integrative plant biology  other citation background
Subject of this commentary, which highlights MpRR-MYB2/5 as newly identified regulators of chloroplast biogenesis (cited from the primary study; no original data here).
Frangedakis E, Yelina NE, Eeda SK, Romani F, Fragkidis A, Haseloff J, Hibberd JM. (2026) · Journal of experimental botany  research experimental tool
Targeted (with MpRR-MYB5) to validate multiplexed CRISPR editing efficiency; used as a test target, not functionally studied.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g13020.1 chr2:13989659..13993809 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13020.2 chr2:13989155..13993809 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.