Mp2g19430



Description

Annotation

Database ID Description
ProSitePatterns PS00503 Pectinesterase signature 2.
Pfam PF01095 Pectinesterase
PANTHER PTHR31321 ACYL-COA THIOESTER HYDROLASE YBHC-RELATED
FunFam G3DSA:2.160.20.10:FF:000008 Pectinesterase
SUPERFAMILY SSF51126 Pectin lyase-like
Gene3D G3DSA:2.160.20.10 -
KEGG K01051 pectinesterase [EC:3.1.1.11]
MapolyID Mapoly0055s0109 -
GO GO:0030599 pectinesterase activity
GO GO:0045490 pectin catabolic process
GO GO:0052689 carboxylic ester hydrolase activity
GO GO:0042545 cell wall modification

Nomenclature

Gene symbol Product Transcript ID Status
MpCE8.5 Cell wall related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

CE8 pectin methylesterase identified by LC-MS/MS as a major abundant cell wall protein (Table 3).

1 core 0 peripheral

Kolkas, H., et al. (2022) · Frontiers in Plant Science  research experimental subject
CE8 pectin methylesterase identified by LC-MS/MS as a major abundant cell wall protein (Table 3).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g19430.1 chr2:23593893..23597234 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.