← Literature list

The Cell Wall Proteome of Marchantia polymorpha Reveals Specificities Compared to Those of Flowering Plants.

Kolkas, H., et al. · 2022 · Frontiers in Plant Science   research

doi:10.3389/fpls.2021.765846   PMID:35095945   PMC8792609

Linked genes (16)  16 core 0 peripheral

Gene ID	Name	Evidence / Role	Function (this paper)
Mp1g11940	paper MpGH3.1 nomenclature	experimental subject	Glycoside hydrolase family 3 (GH3) protein detected by mass spectrometry as a major abundant cell wall protein (Table 3).
Mp2g01420	paper MpCE8.3 nomenclature	experimental subject	CE8 pectin methylesterase detected by mass spectrometry among the most abundant cell wall proteins (Table 3).
Mp2g19430	paper MpCE8.5 nomenclature	experimental subject	CE8 pectin methylesterase identified by LC-MS/MS as a major abundant cell wall protein (Table 3).
Mp3g01170	paper MpCE8.7 nomenclature	experimental subject	Carbohydrate esterase family 8 (CE8, pectin methylesterase) identified by MS as a major abundant cell wall protein, consistent with homogalacturonan in the wall (Table 3).
Mp3g03140	missing	experimental subject	D-mannose-binding lectin identified by LC-MS/MS as abundant, possibly linked to high mannan content and N-glycoprotein interaction (Table 3).
Mp3g21190	missing	experimental subject	Protein of yet unknown function detected by LC-MS/MS among the abundant cell wall proteins of M. polymorpha thalli (Table 3).
Mp5g14440	paper MpPPO9 nomenclature	experimental subject	Polyphenol oxidase detected by LC-MS/MS as a major abundant cell wall protein (Table 3).
Mp5g15320	paper MpPPO17 nomenclature	experimental subject	Polyphenol oxidase detected by MS as a major abundant cell wall protein; first report of such proteins in a cell wall proteome (Table 3).
Mp5g18380	paper MpPPO22 nomenclature	experimental subject	Polyphenol oxidase domain protein identified by mass spectrometry among the abundant cell wall proteins (Table 3).
Mp5g21460	paper MpPPO62 nomenclature	experimental subject	Polyphenol oxidase identified by mass spectrometry among the abundant cell wall proteins of thalli (Table 3).
Mp6g20430	missing	experimental subject	Berberine-bridge oxido-reductase-like (BBE-like) protein detected by MS as a major abundant cell wall protein (Table 3).
Mp7g10860	missing	experimental subject	Purple acid phosphatase identified by MS as a major abundant cell wall protein (Table 3).
Mp8g07080	missing	experimental subject	Serine peptidase of the subtilisin family (peptidase S8) detected by mass spectrometry among the abundant cell wall proteins (Table 3).
Mp8g01700	MpPrx182 paper MpPOD164 nomenclature	experimental subject	Class III peroxidase (MpPrx182) identified by LC-MS/MS as a major abundant cell wall protein in M. polymorpha thalli across the three developmental stages (Table 3). Detected in the cell wall proteome with no functional genetics performed here.
Mp8g09590	MpPrx185 paper MpPOD167 nomenclature	experimental subject	Class III peroxidase (MpPrx185) detected by mass spectrometry as one of the most abundant cell wall proteins across thallus development stages (Table 3). Annotated by family; identification only.
Mp5g10700	MpPrx95 paper MpPOD89 nomenclature	experimental subject	Class III peroxidase (MpPrx95) identified by LC-MS/MS among the major abundant cell wall proteins in thalli (Table 3). MS detection and family annotation only.