Mp6g20430



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.462.20 -
Pfam PF08031 Berberine and berberine like
Pfam PF01565 FAD binding domain
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like
ProSiteProfiles PS51387 PCMH-type FAD-binding domain profile.
Gene3D G3DSA:3.30.43.10 -
Gene3D G3DSA:3.30.465.10 -
PANTHER PTHR42973 BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED
KOG KOG1231 Proteins containing the FAD binding domain; C-term missing; [C]
MapolyID Mapoly0045s0021 -
GO GO:0050660 flavin adenine dinucleotide binding
GO GO:0071949 FAD binding
GO GO:0016491 oxidoreductase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Berberine-bridge oxido-reductase-like (BBE-like) protein detected by MS as a major abundant cell wall protein (Table 3).

1 core 0 peripheral

Kolkas, H., et al. (2022) · Frontiers in Plant Science  research experimental subject
Berberine-bridge oxido-reductase-like (BBE-like) protein detected by MS as a major abundant cell wall protein (Table 3).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g20430.1 chr6:26530571..26534217 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.