Mp4g12230



Description

Annotation

Database ID Description
PRINTS PR00056 Heat shock factor (HSF) domain signature
PANTHER PTHR10015 HEAT SHOCK TRANSCRIPTION FACTOR
Pfam PF00447 HSF-type DNA-binding
FunFam G3DSA:1.10.10.10:FF:000037 Heat stress transcription factor B-4
ProSitePatterns PS00434 HSF-type DNA-binding domain signature.
SMART SM00415 hsfneu3
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.10 -
KEGG K09419 heat shock transcription factor, other eukaryote
KOG KOG0627 Heat shock transcription factor; C-term missing; [K]
MapolyID Mapoly0011s0205 -
GO GO:0043565 sequence-specific DNA binding
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0006355 regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpHSF1 transcription factor, HSF Published

Associated Literature (AI-based literature mining, Beta-version)

Single-copy HSFB1 of Marchantia; Mphsfb1 CRISPR knockout studied under HS and non-HS conditions. Regulates development (meristem branching, antheridiophore formation, cell division, cell-wall, transporters) with mutants failing to form antheridiophores; induces GABA accumulation under heat, representing the rapidly evolved HSFB subclass.

1 core 2 peripheral

Wu, T.-Y., et al. (2022a) · Plant Cell  research experimental subject
Single-copy HSFB1 of Marchantia; Mphsfb1 CRISPR knockout studied under HS and non-HS conditions. Regulates development (meristem branching, antheridiophore formation, cell division, cell-wall, transporters) with mutants failing to form antheridiophores; induces GABA accumulation under heat, representing the rapidly evolved HSFB subclass.
Tan, Q. W., et al. (2023) · Nature Communications  research citation background
Cited as a literature-known gene (Mp4g12230.1) associated with heat tolerance, robustly downregulated under heat stress. Appears only as a DEG/expression-profile entry, not experimentally tested here.
Marchetti, F., et al. (2021) · Plant Cell and Environment  research citation background
Review of M. polymorpha heat-stress response: heat-shock transcription factor among the regulators discussed.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12230.1 chr4:15371377..15374959 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.