Mp4g21320



Description

Annotation

Database ID Description
PANTHER PTHR45625 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Gene3D G3DSA:2.40.100.10 -
PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.
ProSiteProfiles PS50072 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.
FunFam G3DSA:2.40.100.10:FF:000003 Peptidylprolyl isomerase domain and WD repeat-containing 1
SUPERFAMILY SSF50891 Cyclophilin-like
KEGG K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
KOG KOG0882 Cyclophilin-related peptidyl-prolyl cis-trans isomerase; N-term missing; [O]
MapolyID Mapoly0090s0089 -
GO GO:0000413 protein peptidyl-prolyl isomerization
GO GO:0003755 peptidyl-prolyl cis-trans isomerase activity
GO GO:0006457 protein folding

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Candidate gene near the ET239-P64 margin marker insertion site, annotated as a cyclophilin-type peptidyl-prolyl isomerase, identified by genomic analysis.

0 core 1 peripheral

Marron, A. O., et al. (2023) · The Plant Journal  research sequence subject
Candidate gene near the ET239-P64 margin marker insertion site, annotated as a cyclophilin-type peptidyl-prolyl isomerase, identified by genomic analysis.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g21320.1 chr4:28556032..28563935 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.