Mp7g11330



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00249 Myb-like DNA-binding domain
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
FunFam G3DSA:1.10.10.60:FF:000002 Myb family transcription factor
PANTHER PTHR31499 MYB FAMILY TRANSCRIPTION FACTOR PHL11
Coils Coil Coil
Pfam PF14379 MYB-CC type transfactor, LHEQLE motif
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
MapolyID Mapoly0003s0147 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGARP5 transcription factor, GARP Published

Associated Literature (AI-based literature mining, Beta-version)

Central PHR-family MYB-CC transcription factor for internal Pi sensing. Up-regulated under low Pi at all time points and confirmed by qPCR; P1BS motif enrichment analysis was centered on its predicted targets, supporting a conserved PHR1-driven Pi starvation response.

1 core 0 peripheral

Rico-Reséndiz, F., et al. (2020) · International Journal of Molecular Sciences  research experimental subject
Central PHR-family MYB-CC transcription factor for internal Pi sensing. Up-regulated under low Pi at all time points and confirmed by qPCR; P1BS motif enrichment analysis was centered on its predicted targets, supporting a conserved PHR1-driven Pi starvation response.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g11330.1 chr7:14498731..14505608 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.