Mp8g02180



Description

Annotation

Database ID Description
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.10.246.20:FF:000003 Mediator of RNA polymerase II transcription subunit 15a
PANTHER PTHR33137 MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED
SUPERFAMILY SSF47040 Kix domain of CBP (creb binding protein)
Gene3D G3DSA:1.10.246.20 Coactivator CBP, KIX domain
Pfam PF16987 KIX domain
KOG KOG3655 Drebrins and related actin binding proteins; N-term missing; [Z]
KOG KOG0144 RNA-binding protein CUGBP1/BRUNO (RRM superfamily); N-term missing; C-term missing; [A]
MapolyID Mapoly0012s0015 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003713 transcription coactivator activity
GO GO:0003712 transcription coregulator activity
GO GO:0031490 chromatin DNA binding

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Identified as the single full-length MED15 gene in M. polymorpha; its KIX domain interacted with MpDELLA's N-terminus by Y2H/BiFC and coexpression in luciferase assays further boosted MpMYB14/MpDELLA-dependent MpPAL activation, supporting conserved Mediator recruitment.

1 core 0 peripheral

Hernández-García, J., et al. (2024b) · Proceeding of the National Academy of Sciences USA  research experimental subject
Identified as the single full-length MED15 gene in M. polymorpha; its KIX domain interacted with MpDELLA's N-terminus by Y2H/BiFC and coexpression in luciferase assays further boosted MpMYB14/MpDELLA-dependent MpPAL activation, supporting conserved Mediator recruitment.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g02180.1 chr8:2341016..2352950 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g02180.2 chr8:2341016..2353125 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g02180.3 chr8:2341016..2353094 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g02180.4 chr8:2341016..2353094 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g02180.5 chr8:2341016..2353094 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.