| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. |
| SUPERFAMILY | SSF46785 | "Winged helix" DNA-binding domain |
| Gene3D | G3DSA:1.10.10.10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| FunFam | G3DSA:1.10.10.10:FF:000057 | Heat shock transcription factor 1 |
| Pfam | PF00447 | HSF-type DNA-binding |
| PANTHER | PTHR10015 | HEAT SHOCK TRANSCRIPTION FACTOR |
| SMART | SM00415 | hsfneu3 |
| Coils | Coil | Coil |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature |
| KEGG | K09419 | heat shock transcription factor, other eukaryote |
| KOG | KOG0627 | Heat shock transcription factor; C-term missing; [K] |
| MapolyID | Mapoly0018s0001 | - |
| GO | GO:0005634 | nucleus |
| GO | GO:0034605 | cellular response to heat |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0043565 | sequence-specific DNA binding |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II |
No gene symbols are registered for this gene.
Female (U chromosome) variant of MpHSFA1; Mphsfa1U CRISPR knockout characterized under heat. Expressed ~2-2.5-fold lower than MpHSFA1V and its promoter lacks heat shock elements, correlating with higher heat sensitivity in female (BC3) plants.
1 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >MpUg00290.1 TATTAAGGCT AGCGGCTAAA CTGAAGATGA ATTGCGAATA GGCTCGCATC GTACTTTCCT TCCCTTGCAT TGCCTTTCCG TGCCGTACCT GCTGCGTCAG GTTTAGAAAC GTCGTGTGGG GGAGCTGACG AAGGTTGATT CAACGGGGTT TCCTCGAGCA GAATACAACG TACAAATTTG GAAGGTTGAG TTTGCACCTG AGACACTCCT TGAATAGGTC GGTCCTAGAG ATTGAGCTAT TTCAGCTTTT GTGATTTGAA GAGTGGGCGG AGGAAGAGGA ACCCGCAAGA GAAGCAGCAC CATCGAATCT TCAAGGTGGA AGGTACAGCT TGGTCGGAAT GAATACGGAG AAGGGTTTCC AGGATCGAGG TGAAGGCTGG GCTGTTCGGC GCTTCTCGTA GGCACCAGGT GATAAGTCAC CTTATGAGTC TTGCCACTGT AGTTATCATT ACCTAGGGAG AAAGGACCGG AGCCGACGAT TTCGAGGCAT TACAGAGACT TTTTATAACA GTATCTAACC TTCGAGCCCA TGAGAACTAG CCCTAGAAGA AAGAATTGGA ACTGAAGCGG TCGTTGGTGA CTTCGGCGGA TCTTATTTAT GTGAAGAATT TTGTCATTCG TAGAGACGAT TGTGTAGACG AATTGAACGG CCGTGATCAC TAGACCGGAT CGAATCTACC TGGTATGGAT AGCGTGACTA CTGTTAACAA ACTTGCAACG TAACACGCGA AGGACTCCGT GGAATCAGAT CCACTTCAAT GTGACTATCG AAGGCGAGAG AGGTCTTTTG AAAATTCAGC TCACATTGGT GTTAATGTGG AATGTGATTA CTGCCTCAAG GTTCTAACCT GAGAAGAGTC CTTGTGAAGA TCGCAAGAAA CTGGCAGCTT AGAGTGTGCT GCTTGATCAG GGTACTTTGA TAGCCGTGGA GGAGGTGAAA GTTTTCGAGT TAGGTGTCAG GAGTTTCACT TTGGAATGTG CACGACCCTA AACCCTGAAT TTTCTGTACT GTCACATTAG GTACTATGCC GAATCCTATC TAAAGCTTCT TCGAGTTCTT CTTGAGTACA TTCCACTCTA CGCCACCATT TCTTCCCCAC TAGCGCTAAA CTGAATTATT TCTCGTCTGG AGTGAAGATT TCAGCTGCAC CATGTCTCCG TAAAGATAAA GTTCACTCCC ATCACAGTGA CTGTGGTCGA AGACTGGTCA AGAAATCCTC GTGGCCATCT ATTCAAAATT ATCATATCAC CGTGGCGCTG TACCACTGGA GTGCAACCTC TATGTCAGAA CTGACCTTCG GAGTGTACAA TTTCTTCGGA GGTTTTGGTC AAAGGCAGGT ATTGATTGAC CCCCTGGTAA AGTATTGTGC ACAGACGTAG TACAGTCTGC ACACCCAAAC TAGTTGAGCT CAAGTTTGGA GAGGCGCGCT TTGAAACCCT TACCTATGCG AGGATGAAAA AGCAGCAGCA GCACTGTATT GCAAGCATCG TGAACTGCCT TTGCTCGGGA AGTACATTAA CAGGTCGGTA TCGCTCGGCC CTTCTCGGTT AAATGGGACT CCAGCTCGTT GTACTGCTCG CACATGATGA CTACTTCCCC GTCAGAAAAT TCAATCTTAA GGTGGCCTGA AGACTCTAGA GAAAATTTGC GTCTAAGTGG TCCGGCCACA TCTTCGGAGA AGCCTCTTAC TTCATCTGGT CCTCAGCCAA TGGATGGACT CCAGAGTAGT GGGCCTCCTC CTTTCCTCAA TAAAACTTAT GACATGGTGG ACGATCCTGC CACAGATGCA GTTGTTTCGT GGAGCAGTAG TAGCAACAGT TTCATTGTGT GGAACCCCCC AGAGTTTGCT CGAGACCTGT TACCAAAGTA TTTCAAGCAC AACAATTTCT CCAGTTTTGT GCGGCAACTC AACACCTATG TAAGACAAGA TGCTTCCGTT TTGTATGAAT TGCAATGAAA AGATTGCCCT AAGAGTGTAC TTAGACTTTC CGTTTTCAAT GCTTGACTTG GAATAGGCTT GAAATAGCGT GATGTCCATG TGTGAGATCT GTTCTGTACT TTTGAACTCA ACCGATGAAA TTTTGTGCTA TTATATATGT GCAGGGTTTC CGCAAAGTAG ATCCCGATCG CTGGGAGTTT GCGAATGAAG GATTCCTCCG CGGCCAAAGA CATTTATTGA AGAATATTCA CCGCCGAAAG CCTGTGTCTC ACAATCAGCC TCAGCCGCAA CCACCATCGC AAAGTTCAAC TCTTGGGCCC TGTGTAGAGG TAGGCAAATT TGGTTTGGAA GGGGAGATTG AACGCCTTAA AAGGGACAAG AACGTTTTGA TGCTGGAGTT GGTTAGATTG AGACAACAGC AGCAGGCGAC AGAGCGTGAA TTGCAGGTTA TGGGCCAGCG ACTGCAGGTC ACGGAACAGA GGCAGCAACA AATGATGTCC TTTTTGGCGA AGGCAATGCA AAATCCTAGC TTTCTGGCTC AGCTTGTGCA ACAAGAGAAC AGCAAACGTG TCGCCACTGA CCGGAAAAGG AGGCGTTTAC CGAAACAGGA AGGGGCTGGG GACTCTGGAA GCTCTGGGTC TGCCTCAGAA GGCCAAATAG TGAAGTACCA GCCAAATACA TCAACTGACT CTGCCCGAGC CGTCCTTTTG CATCTGTTCA ACAACACCGA ATCCACGACA AAGATGGAAG CGAACAATTC CTTTGAAGCC TTGTTCCGTG ACATGGGGTC AGGGCGCGCA GAAGAGTTGC AGGAGGGCAG CTCTTTGAAC CGACAGTCCG GAGTAACTCT TACCGAGATG CATGTTCCTG TGACCGACGG GTTTCCCATT TCATCAGTCG ACGAATTGCC GGAGGAGACG GCTGCCTGTC TTACTCCCTC CTCTCCCATC ATTGTTGCAG GGACACAAGT AGGAGCTCAA GCAACTGCTA ACGTTCTAGA GGGTGGTAAT TATCTGATAC AATCCTCACT AACAGATGTT TCCGCAATAG AGAGCAATGG ACAATCTGTA GCCCTGGATT GTGGTATCAG CAGCAGTGCC GGTCGTATTT CTCCTGCAGA CGATGCAGGG ACTGGCGTAG ATAGTGCGGG AGTCGCCCCA GGCATAAATG ATGTATTCTG GGAGCAGTTT CTGCGGGGAA ATCCCGACTC TTCAGAAACT GAGACTGAGG AAACGGAATT CGGAGATAAC GCTGCACGTG AAGGAGAAGG AGAACCTATG GGGAGTGTAC AATGGTGGAG TAACAAGCCG AGTGTTGATC AGCTTGCTGA ACAGATGGAG CAGCTTGCTC CAGGATCGAA GCCTTGAGGT CATAGTCAGC AGCTTAATGG GAAGTGAAGT AGCGTTGGAC ATAGTGATGT AATATTTCTG GTTGCTCAAG CGGTATTGCC TGTTGCTAGC ATCTGGAAGA AGTCGTCGGT GCATGGTTCT GAGAGAGAAA AGTTGAATGA GAACAGAGAG TAGATGATTG TGAAGCTAGG CAGCCTCGAT ACACATGATA TGGATCATGC TTCTTGACGC ACCTTTGACA GTTTTCTAAT TTTCTTTATC TTTGTAATTA TCACGAGTTT TGTGTCATTG GTTTACCCTC TGTCTGGGAT CAGTTTGCTA TGTGTTTCTT TCTCATCGTT GAGACTCTTG GTGAATAAAT |
mRNA UTR + CDS |
| >MpUg00290.1 TATTAAGGCT AGCGGCTAAA CTGAAGATGA ATTGCGAATA GGCTCGCATC GTACTTTCCT TCCCTTGCAT TGCCTTTCCG TGCCGTACCT GCTGCGTCAG GTTTAGAAAC GTCGTGTGGG GGAGCTGACG AAGGTTGATT CAACGGGGTT TCCTCGAGCA GAATACAACG TACAAATTTG GAAGGTTGAG TTTGCACCTG AGACACTCCT TGAATAGGTC GGTCCTAGAG ATTGAGCTAT TTCAGCTTTT GTGATTTGAA GAGTGGGCGG AGGAAGAGGA ACCCGCAAGA GAAGCAGCAC CATCGAATCT TCAAGGTGGA AGGTACAGCT TGGTCGGAAT GAATACGGAG AAGGGTTTCC AGGATCGAGG TGAAGGCTGG GCTGTTCGGC GCTTCTCGTA GGCACCAGGT GATAAGTCAC CTTATGAGTC TTGCCACTGT AGTTATCATT ACCTAGGGAG AAAGGACCGG AGCCGACGAT TTCGAGGCAT TACAGAGACT TTTTATAACA GTATCTAACC TTCGAGCCCA TGAGAACTAG CCCTAGAAGA AAGAATTGGA ACTGAAGCGG TCGTTGGTGA CTTCGGCGGA TCTTATTTAT GTGAAGAATT TTGTCATTCG TAGAGACGAT TGTGTAGACG AATTGAACGG CCGTGATCAC TAGACCGGAT CGAATCTACC TGGTATGGAT AGCGTGACTA CTGTTAACAA ACTTGCAACG TAACACGCGA AGGACTCCGT GGAATCAGAT CCACTTCAAT GTGACTATCG AAGGCGAGAG AGGTCTTTTG AAAATTCAGC TCACATTGGT GTTAATGTGG AATGTGATTA CTGCCTCAAG GTTCTAACCT GAGAAGAGTC CTTGTGAAGA TCGCAAGAAA CTGGCAGCTT AGAGTGTGCT GCTTGATCAG GGTACTTTGA TAGCCGTGGA GGAGGTGAAA GTTTTCGAGT TAGGTGTCAG GAGTTTCACT TTGGAATGTG CACGACCCTA AACCCTGAAT TTTCTGTACT GTCACATTAG GTACTATGCC GAATCCTATC TAAAGCTTCT TCGAGTTCTT CTTGAGTACA TTCCACTCTA CGCCACCATT TCTTCCCCAC TAGCGCTAAA CTGAATTATT TCTCGTCTGG AGTGAAGATT TCAGCTGCAC CATGTCTCCG TAAAGATAAA GTTCACTCCC ATCACAGTGA CTGTGGTCGA AGACTGGTCA AGAAATCCTC GTGGCCATCT ATTCAAAATT ATCATATCAC CGTGGCGCTG TACCACTGGA GTGCAACCTC TATGTCAGAA CTGACCTTCG GAGTGTACAA TTTCTTCGGA GGTTTTGGTC AAAGGCAGGT ATTGATTGAC CCCCTGGTAA AGTATTGTGC ACAGACGTAG TACAGTCTGC ACACCCAAAC TAGTTGAGCT CAAGTTTGGA GAGGCGCGCT TTGAAACCCT TACCTATGCG AGGATGAAAA AGCAGCAGCA GCACTGTATT GCAAGCATCG TGAACTGCCT TTGCTCGGGA AGTACATTAA CAGGTCGGTA TCGCTCGGCC CTTCTCGGTT AAATGGGACT CCAGCTCGTT GTACTGCTCG CACATGATGA CTACTTCCCC GTCAGAAAAT TCAATCTTAA GGTGGCCTGA AGACTCTAGA GAAAATTTGC GTCTAAGTGG TCCGGCCACA TCTTCGGAGA AGCCTCTTAC TTCATCTGGT CCTCAGCCAA TGGATGGACT CCAGAGTAGT GGGCCTCCTC CTTTCCTCAA TAAAACTTAT GACATGGTGG ACGATCCTGC CACAGATGCA GTTGTTTCGT GGAGCAGTAG TAGCAACAGT TTCATTGTGT GGAACCCCCC AGAGTTTGCT CGAGACCTGT TACCAAAGTA TTTCAAGCAC AACAATTTCT CCAGTTTTGT GCGGCAACTC AACACCTATG GTTTCCGCAA AGTAGATCCC GATCGCTGGG AGTTTGCGAA TGAAGGATTC CTCCGCGGCC AAAGACATTT ATTGAAGAAT ATTCACCGCC GAAAGCCTGT GTCTCACAAT CAGCCTCAGC CGCAACCACC ATCGCAAAGT TCAACTCTTG GGCCCTGTGT AGAGGTAGGC AAATTTGGTT TGGAAGGGGA GATTGAACGC CTTAAAAGGG ACAAGAACGT TTTGATGCTG GAGTTGGTTA GATTGAGACA ACAGCAGCAG GCGACAGAGC GTGAATTGCA GGTTATGGGC CAGCGACTGC AGGTCACGGA ACAGAGGCAG CAACAAATGA TGTCCTTTTT GGCGAAGGCA ATGCAAAATC CTAGCTTTCT GGCTCAGCTT GTGCAACAAG AGAACAGCAA ACGTGTCGCC ACTGACCGGA AAAGGAGGCG TTTACCGAAA CAGGAAGGGG CTGGGGACTC TGGAAGCTCT GGGTCTGCCT CAGAAGGCCA AATAGTGAAG TACCAGCCAA ATACATCAAC TGACTCTGCC CGAGCCGTCC TTTTGCATCT GTTCAACAAC ACCGAATCCA CGACAAAGAT GGAAGCGAAC AATTCCTTTG AAGCCTTGTT CCGTGACATG GGGTCAGGGC GCGCAGAAGA GTTGCAGGAG GGCAGCTCTT TGAACCGACA GTCCGGAGTA ACTCTTACCG AGATGCATGT TCCTGTGACC GACGGGTTTC CCATTTCATC AGTCGACGAA TTGCCGGAGG AGACGGCTGC CTGTCTTACT CCCTCCTCTC CCATCATTGT TGCAGGGACA CAAGTAGGAG CTCAAGCAAC TGCTAACGTT CTAGAGGGTG GTAATTATCT GATACAATCC TCACTAACAG ATGTTTCCGC AATAGAGAGC AATGGACAAT CTGTAGCCCT GGATTGTGGT ATCAGCAGCA GTGCCGGTCG TATTTCTCCT GCAGACGATG CAGGGACTGG CGTAGATAGT GCGGGAGTCG CCCCAGGCAT AAATGATGTA TTCTGGGAGC AGTTTCTGCG GGGAAATCCC GACTCTTCAG AAACTGAGAC TGAGGAAACG GAATTCGGAG ATAACGCTGC ACGTGAAGGA GAAGGAGAAC CTATGGGGAG TGTACAATGG TGGAGTAACA AGCCGAGTGT TGATCAGCTT GCTGAACAGA TGGAGCAGCT TGCTCCAGGA TCGAAGCCTT GAGGTCATAG TCAGCAGCTT AATGGGAAGT GAAGTAGCGT TGGACATAGT GATGTAATAT TTCTGGTTGC TCAAGCGGTA TTGCCTGTTG CTAGCATCTG GAAGAAGTCG TCGGTGCATG GTTCTGAGAG AGAAAAGTTG AATGAGAACA GAGAGTAGAT GATTGTGAAG CTAGGCAGCC TCGATACACA TGATATGGAT CATGCTTCTT GACGCACCTT TGACAGTTTT CTAATTTTCT TTATCTTTGT AATTATCACG AGTTTTGTGT CATTGGTTTA CCCTCTGTCT GGGATCAGTT TGCTATGTGT TTCTTTCTCA TCGTTGAGAC TCTTGGTGAA TAAAT |
CDS |
| >MpUg00290.1 ATGATGACTA CTTCCCCGTC AGAAAATTCA ATCTTAAGGT GGCCTGAAGA CTCTAGAGAA AATTTGCGTC TAAGTGGTCC GGCCACATCT TCGGAGAAGC CTCTTACTTC ATCTGGTCCT CAGCCAATGG ATGGACTCCA GAGTAGTGGG CCTCCTCCTT TCCTCAATAA AACTTATGAC ATGGTGGACG ATCCTGCCAC AGATGCAGTT GTTTCGTGGA GCAGTAGTAG CAACAGTTTC ATTGTGTGGA ACCCCCCAGA GTTTGCTCGA GACCTGTTAC CAAAGTATTT CAAGCACAAC AATTTCTCCA GTTTTGTGCG GCAACTCAAC ACCTATGGTT TCCGCAAAGT AGATCCCGAT CGCTGGGAGT TTGCGAATGA AGGATTCCTC CGCGGCCAAA GACATTTATT GAAGAATATT CACCGCCGAA AGCCTGTGTC TCACAATCAG CCTCAGCCGC AACCACCATC GCAAAGTTCA ACTCTTGGGC CCTGTGTAGA GGTAGGCAAA TTTGGTTTGG AAGGGGAGAT TGAACGCCTT AAAAGGGACA AGAACGTTTT GATGCTGGAG TTGGTTAGAT TGAGACAACA GCAGCAGGCG ACAGAGCGTG AATTGCAGGT TATGGGCCAG CGACTGCAGG TCACGGAACA GAGGCAGCAA CAAATGATGT CCTTTTTGGC GAAGGCAATG CAAAATCCTA GCTTTCTGGC TCAGCTTGTG CAACAAGAGA ACAGCAAACG TGTCGCCACT GACCGGAAAA GGAGGCGTTT ACCGAAACAG GAAGGGGCTG GGGACTCTGG AAGCTCTGGG TCTGCCTCAG AAGGCCAAAT AGTGAAGTAC CAGCCAAATA CATCAACTGA CTCTGCCCGA GCCGTCCTTT TGCATCTGTT CAACAACACC GAATCCACGA CAAAGATGGA AGCGAACAAT TCCTTTGAAG CCTTGTTCCG TGACATGGGG TCAGGGCGCG CAGAAGAGTT GCAGGAGGGC AGCTCTTTGA ACCGACAGTC CGGAGTAACT CTTACCGAGA TGCATGTTCC TGTGACCGAC GGGTTTCCCA TTTCATCAGT CGACGAATTG CCGGAGGAGA CGGCTGCCTG TCTTACTCCC TCCTCTCCCA TCATTGTTGC AGGGACACAA GTAGGAGCTC AAGCAACTGC TAACGTTCTA GAGGGTGGTA ATTATCTGAT ACAATCCTCA CTAACAGATG TTTCCGCAAT AGAGAGCAAT GGACAATCTG TAGCCCTGGA TTGTGGTATC AGCAGCAGTG CCGGTCGTAT TTCTCCTGCA GACGATGCAG GGACTGGCGT AGATAGTGCG GGAGTCGCCC CAGGCATAAA TGATGTATTC TGGGAGCAGT TTCTGCGGGG AAATCCCGAC TCTTCAGAAA CTGAGACTGA GGAAACGGAA TTCGGAGATA ACGCTGCACG TGAAGGAGAA GGAGAACCTA TGGGGAGTGT ACAATGGTGG AGTAACAAGC CGAGTGTTGA TCAGCTTGCT GAACAGATGG AGCAGCTTGC TCCAGGATCG AAGCCTTGA |
Protein |
| >MpUg00290.1 MMTTSPSENS ILRWPEDSRE NLRLSGPATS SEKPLTSSGP QPMDGLQSSG PPPFLNKTYD MVDDPATDAV VSWSSSSNSF IVWNPPEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL RGQRHLLKNI HRRKPVSHNQ PQPQPPSQSS TLGPCVEVGK FGLEGEIERL KRDKNVLMLE LVRLRQQQQA TERELQVMGQ RLQVTEQRQQ QMMSFLAKAM QNPSFLAQLV QQENSKRVAT DRKRRRLPKQ EGAGDSGSSG SASEGQIVKY QPNTSTDSAR AVLLHLFNNT ESTTKMEANN SFEALFRDMG SGRAEELQEG SSLNRQSGVT LTEMHVPVTD GFPISSVDEL PEETAACLTP SSPIIVAGTQ VGAQATANVL EGGNYLIQSS LTDVSAIESN GQSVALDCGI SSSAGRISPA DDAGTGVDSA GVAPGINDVF WEQFLRGNPD SSETETEETE FGDNAAREGE GEPMGSVQWW SNKPSVDQLA EQMEQLAPGS KP |