Mp1g15230



Description

Annotation

Database ID Description
Pfam PF10250 GDP-fucose protein O-fucosyltransferase
FunFam G3DSA:3.40.50.11350:FF:000011 O-fucosyltransferase 28
PANTHER PTHR31741 OS02G0726500 PROTEIN-RELATED
CDD cd11299 O-FucT_plant
KEGG K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351]
MapolyID Mapoly0033s0138 -
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpRRT1 RG-I rhamnosyltransferases Provisional

Associated Literature (AI-based literature mining, Beta-version)

Genome locus of MpRRT1, the central gene of this study; its cDNA was amplified by PCR and expressed as recombinant protein in N. benthamiana. The encoded enzyme shows RG-I rhamnosyltransferase activity, localizes at the cis-Golgi, and CRISPR knockouts were generated.

2 core 2 peripheral

Kang HS, Tong X, Mariette A, Leong M, Beahan C, Flores-Sandoval E, Pedersen GB, Rautengarten C, Bowman JL, Ebert B, Bacic A, Doblin MS, Persson S, Lampugnani ER. (2025) · The Plant journal : for cell and molecular biology  research experimental subject
M. polymorpha RRT (RG-I rhamnosyltransferase) ortholog identified and cloned into the study's cDNA library.
Wachananawat, B., et al. (2020) · Frontiers in Plant Science  research experimental subject
Genome locus of MpRRT1, the central gene of this study; its cDNA was amplified by PCR and expressed as recombinant protein in N. benthamiana. The encoded enzyme shows RG-I rhamnosyltransferase activity, localizes at the cis-Golgi, and CRISPR knockouts were generated.
Pfeifer, L., et al. (2022) · Journal of Experimental Botany  research citation background
Review on bryophyte cell walls: cites MpRRT1 as an RG-I rhamnosyltransferase characterized by heterologous expression in N. benthamiana.
Bowman, J. L., et al. (2022) · Plant Cell  review citation comparator
Marchantia gene cited in Bowman et al. (2022) model-system review

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15230.1 chr1:15962091..15967106 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g15230.2 chr1:15959275..15967084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g15230.3 chr1:15959280..15967085 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.