| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR10543 | BETA-CAROTENE DIOXYGENASE |
| Pfam | PF03055 | Retinal pigment epithelial membrane protein |
| KEGG | K09840 | 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] |
| KOG | KOG1285 | Beta, beta-carotene 15,15'-dioxygenase and related enzymes; [Q] |
| MapolyID | Mapoly0015s0066 | - |
| GO | GO:0010436 | carotenoid dioxygenase activity |
| GO | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| GO | GO:0009570 | chloroplast stroma |
| GO | GO:0016121 | carotene catabolic process |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpNCED | 9-cis-epoxycarotenoid dioxigenase | Published |
9-cis-epoxycarotenoid dioxigenase (from nomenclature)
0 core 4 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g07800.1 ATCGAGAGCA ATTGCGACTG CCAGCCAGTG TTGTTCTACG AGCTCCACCT GATATCCTCG TCGTCTCAAA CTACCAGTTT CGAGCCTTAG CTTCTCGTCG TGCGGACTTG TGCGCCAAGC TGCTCGCGTC CTGGACTACC TGCATTGGAG CCGTCTAGCC TCCTCTATAT ACTCGTGTCT CTGACTCCAC TCATCCCCTC CCTCTTCTCA TTCTGTTCGT TCGCTCTGTC GAATTCGCCT CCCCTTCTCC TCCTGACCTG AATTCCTCTG TCCTCCTCCA TTGTCCAGCT TTAGCCTCAG AATCCTCAAC GCCTGTCAAA TTCCTCCGCT CGAGCCGCGT CTGCCACTTC GTCCGTGGCC GCACTTGCCT TTCCCAAGTC AGAGAGTAAT CTAATCAGAC TCTGAGATAA ATCACAAAAT CTCGTTCAAT CTCCAAAGAC AGAACCATTG TGATGTGTTC CTGCGCCATT TAGCGATTCG AGCCAAGGGA TGGTTACCAA GAGATCTGTC GGCGGGATTC GGCGGGAATC GAGTTATTAG CAGGCTCCGC GAGTGAGTTC CTCCGAAAAA TCTCCGCTTA GTAGTATTCG TCGTCCTCGG AACGACCGCG CTGAAAGCTT GTTCGAGGAG TTCGGTCCAA AATGTTGGGT CTTAAGAGTG CTTCTGCAGC GTCGCTTGCA AGCATCACCA ATCAAAGCAC TGCATTAGCC GGCGGTCATG GGAACCTGTC GCAACAGATC TCGCTCAAAG CTTCCGCCGC GCAGCACAGA GGTGGCAGGA AGAATTCCAT GAGCGTCAAA TGCCAGAGCA CTTCCAGCCT GCCTCCCCCT CCCGTAGACA CGCACGTAAC AGAGGCGTCT CCGTCCAGAA TCCAGAGGGC CGAGTTCCCG GCTCCGGACA GGGCTGCGCC TCAGAAATCG GGCAAGCGTC GGAATTTCTT CCAGCAGATG GCCGCCTCCG CCCTGGACCA CATTGAGCGC ACGGTCGTGC GGCACATCGA GTCGCAAGTG CCTCTTCCTT CCACCGCGGA TCCTCGCGTG CAACTGGAGG GCAATTTTTC GCCCGTGGAG GAAAGCCCCG TTCAGCACGA GCTCGAAGTG GTGGGCAAAC TGCCGGCGAA TCTGCAGGGC GTATATATGA GGAATGGCGC GAATCCGCGG TTCCAACCCG AGGGCGGCCA CCATTTTTTC GACGGGGATG GCATGATTCA TGCAGTGCGG TTCAAAGACG GGATTGTGAG TCACTGCTCG CGCTTCACGA AAACGTACCG CCTGCGCGTC GAGGAAGAAG AGGGGCATCC GCTCTTCCCG AAAGCCATCG GGGAGTTACA CGGCCACGGC GGGGTGGCTC GTCTAGCCTT ATACTTTGCA CGCAGCTTGG CCGGAATCGT CGACTCGTCC CAAGGGATGG GCGTCGCAAA TGCAGGACTC ATCTACCACA ATGGGCGCCT GCTCGCCATG TCGGAGGACG ATCAGCCGTA CCTGGTGCGC ATTAAGGAGG ACGGCGATCT GGAGACCGTG AGAAAGTTCG ACTTCGACGG CCAGCATCAC AAATCGATGA TTGCGCACCC GAAGATCGAC CCGGCCACGG GAGAAATGTT CGCGCTGAGC TACAATCCGC TCATGCCGCC GCATCTCTAC TGCTTCCGGG TCGGCCCGGA CGGGAAGAAG GCGCCCGAAG TGGCCATCAC GCTGCCGGAG GCGACGATGA TGCACGATTT CGCCATCACC AAGCGCTTCG TGGTGATCCC GGACCAGCAG GTGGTGTTCC GAATGACAGA AATGCTCAAG GGCGGATCCC CAGTCATCTA CAACCCCGAG AAGATGGCGC GGTACGGCCT GCTGCCCAAG TACGACAATG ATGAGAGCCG AATTCAATGG ATTGAGGTGC CGGACTGCTT CTGCTTTCAC CTGTGGAATG CGTGGGAGGA GGGCGACGAG GTGGTGGTTC TGGGCTCGTG CATGACGCCG GCCGATTCCA TCTTCAACGA GTCTGATCAG CCGCTGCGCA GCCTGCTCTC GGAAATTCGC CTCAACACCA CGACGGGCAA ATCGACGCGC AGAGTTCTGG CCGAGACCAA TCTGGAGGCA GGCCAGCTCA ATCGCTCGTA CGTCGGCCAG CAGAACAGAT TCTTGTACCT GGCGATCGCC GAGCCCTGGC CCAAGATTTC GGGCATTGCG CGCGTCGATC TGCAGGCAGA GGAAGGCGTT CGCGTGACCA AGCACCTCTA CGAGGACGGC TGCTACGGGG CCGAGCCGGT GTTCGTGCCG CGCACCTCCG ACCCCAATGC GCCGGAGGAC GACGGCTACG TGCTGACTTT CAAGCACAAC GAGAAAACCG GTCGATCCGA GCTTCTGGTG CTGGACGCCA GCTCGCCATC GCTGGACCTG CTGGCCACCG TGAAATTGCC CTCCAGAGTC CCCTACGGAT TCCACGGGAC CTTCGTGAGC GAGGCCGATC TGGCCAAGCA GTCCCTGGAG TGACGATGCG CCGGAGCCTC GGGCGCCATC ACGCAATAAC GACCACGGCG CATGCTGCCG TGGGTGTGGA ATACATCTTG TAGATTATCG CCTGCGCCAT TTTTCACCAA ATTGGGGGAA TGCCCAATCG CAATAACTGC AGCCATTCGC ACAGTAGACA GAATAACATT TCCTCTACAT TAGAGCTTAG CAATTTGTAC TATAGAATTC CGGAACTGAA CACACAATGA CTCAACCCAG TCATAAAATC AGGCGGTGTA CTTTGAAAAT TATAGTACCT ACACAGCACT CCCGCAATCT GTCAGTCAGA AGGGGGAAGT GAATATTTTT TGACTCCAAG AAGGGCGCCT CATTCTCTTT CTCCTGGGAG CTCAGAAACA CTATACTCCA TATTTTTTTT GTAGCATAGG TCACATATGT AAAGATTTAG AGCACCTCGG TGAGCTTGAG CTTATCCGGC CTTAGATGTA CATAACAGAC GTTTCTCATC GATCTTCAAT GTAAAGATCC TTTCAATCCA TAAAATCCTC TCGATGCCCC |
mRNA UTR + CDS |
| >Mp2g07800.1 ATCGAGAGCA ATTGCGACTG CCAGCCAGTG TTGTTCTACG AGCTCCACCT GATATCCTCG TCGTCTCAAA CTACCAGTTT CGAGCCTTAG CTTCTCGTCG TGCGGACTTG TGCGCCAAGC TGCTCGCGTC CTGGACTACC TGCATTGGAG CCGTCTAGCC TCCTCTATAT ACTCGTGTCT CTGACTCCAC TCATCCCCTC CCTCTTCTCA TTCTGTTCGT TCGCTCTGTC GAATTCGCCT CCCCTTCTCC TCCTGACCTG AATTCCTCTG TCCTCCTCCA TTGTCCAGCT TTAGCCTCAG AATCCTCAAC GCCTGTCAAA TTCCTCCGCT CGAGCCGCGT CTGCCACTTC GTCCGTGGCC GCACTTGCCT TTCCCAAGTC AGAGAGTAAT CTAATCAGAC TCTGAGATAA ATCACAAAAT CTCGTTCAAT CTCCAAAGAC AGAACCATTG TGATGTGTTC CTGCGCCATT TAGCGATTCG AGCCAAGGGA TGGTTACCAA GAGATCTGTC GGCGGGATTC GGCGGGAATC GAGTTATTAG CAGGCTCCGC GAGTGAGTTC CTCCGAAAAA TCTCCGCTTA GTAGTATTCG TCGTCCTCGG AACGACCGCG CTGAAAGCTT GTTCGAGGAG TTCGGTCCAA AATGTTGGGT CTTAAGAGTG CTTCTGCAGC GTCGCTTGCA AGCATCACCA ATCAAAGCAC TGCATTAGCC GGCGGTCATG GGAACCTGTC GCAACAGATC TCGCTCAAAG CTTCCGCCGC GCAGCACAGA GGTGGCAGGA AGAATTCCAT GAGCGTCAAA TGCCAGAGCA CTTCCAGCCT GCCTCCCCCT CCCGTAGACA CGCACGTAAC AGAGGCGTCT CCGTCCAGAA TCCAGAGGGC CGAGTTCCCG GCTCCGGACA GGGCTGCGCC TCAGAAATCG GGCAAGCGTC GGAATTTCTT CCAGCAGATG GCCGCCTCCG CCCTGGACCA CATTGAGCGC ACGGTCGTGC GGCACATCGA GTCGCAAGTG CCTCTTCCTT CCACCGCGGA TCCTCGCGTG CAACTGGAGG GCAATTTTTC GCCCGTGGAG GAAAGCCCCG TTCAGCACGA GCTCGAAGTG GTGGGCAAAC TGCCGGCGAA TCTGCAGGGC GTATATATGA GGAATGGCGC GAATCCGCGG TTCCAACCCG AGGGCGGCCA CCATTTTTTC GACGGGGATG GCATGATTCA TGCAGTGCGG TTCAAAGACG GGATTGTGAG TCACTGCTCG CGCTTCACGA AAACGTACCG CCTGCGCGTC GAGGAAGAAG AGGGGCATCC GCTCTTCCCG AAAGCCATCG GGGAGTTACA CGGCCACGGC GGGGTGGCTC GTCTAGCCTT ATACTTTGCA CGCAGCTTGG CCGGAATCGT CGACTCGTCC CAAGGGATGG GCGTCGCAAA TGCAGGACTC ATCTACCACA ATGGGCGCCT GCTCGCCATG TCGGAGGACG ATCAGCCGTA CCTGGTGCGC ATTAAGGAGG ACGGCGATCT GGAGACCGTG AGAAAGTTCG ACTTCGACGG CCAGCATCAC AAATCGATGA TTGCGCACCC GAAGATCGAC CCGGCCACGG GAGAAATGTT CGCGCTGAGC TACAATCCGC TCATGCCGCC GCATCTCTAC TGCTTCCGGG TCGGCCCGGA CGGGAAGAAG GCGCCCGAAG TGGCCATCAC GCTGCCGGAG GCGACGATGA TGCACGATTT CGCCATCACC AAGCGCTTCG TGGTGATCCC GGACCAGCAG GTGGTGTTCC GAATGACAGA AATGCTCAAG GGCGGATCCC CAGTCATCTA CAACCCCGAG AAGATGGCGC GGTACGGCCT GCTGCCCAAG TACGACAATG ATGAGAGCCG AATTCAATGG ATTGAGGTGC CGGACTGCTT CTGCTTTCAC CTGTGGAATG CGTGGGAGGA GGGCGACGAG GTGGTGGTTC TGGGCTCGTG CATGACGCCG GCCGATTCCA TCTTCAACGA GTCTGATCAG CCGCTGCGCA GCCTGCTCTC GGAAATTCGC CTCAACACCA CGACGGGCAA ATCGACGCGC AGAGTTCTGG CCGAGACCAA TCTGGAGGCA GGCCAGCTCA ATCGCTCGTA CGTCGGCCAG CAGAACAGAT TCTTGTACCT GGCGATCGCC GAGCCCTGGC CCAAGATTTC GGGCATTGCG CGCGTCGATC TGCAGGCAGA GGAAGGCGTT CGCGTGACCA AGCACCTCTA CGAGGACGGC TGCTACGGGG CCGAGCCGGT GTTCGTGCCG CGCACCTCCG ACCCCAATGC GCCGGAGGAC GACGGCTACG TGCTGACTTT CAAGCACAAC GAGAAAACCG GTCGATCCGA GCTTCTGGTG CTGGACGCCA GCTCGCCATC GCTGGACCTG CTGGCCACCG TGAAATTGCC CTCCAGAGTC CCCTACGGAT TCCACGGGAC CTTCGTGAGC GAGGCCGATC TGGCCAAGCA GTCCCTGGAG TGACGATGCG CCGGAGCCTC GGGCGCCATC ACGCAATAAC GACCACGGCG CATGCTGCCG TGGGTGTGGA ATACATCTTG TAGATTATCG CCTGCGCCAT TTTTCACCAA ATTGGGGGAA TGCCCAATCG CAATAACTGC AGCCATTCGC ACAGTAGACA GAATAACATT TCCTCTACAT TAGAGCTTAG CAATTTGTAC TATAGAATTC CGGAACTGAA CACACAATGA CTCAACCCAG TCATAAAATC AGGCGGTGTA CTTTGAAAAT TATAGTACCT ACACAGCACT CCCGCAATCT GTCAGTCAGA AGGGGGAAGT GAATATTTTT TGACTCCAAG AAGGGCGCCT CATTCTCTTT CTCCTGGGAG CTCAGAAACA CTATACTCCA TATTTTTTTT GTAGCATAGG TCACATATGT AAAGATTTAG AGCACCTCGG TGAGCTTGAG CTTATCCGGC CTTAGATGTA CATAACAGAC GTTTCTCATC GATCTTCAAT GTAAAGATCC TTTCAATCCA TAAAATCCTC TCGATGCCCC |
CDS |
| >Mp2g07800.1 ATGTTGGGTC TTAAGAGTGC TTCTGCAGCG TCGCTTGCAA GCATCACCAA TCAAAGCACT GCATTAGCCG GCGGTCATGG GAACCTGTCG CAACAGATCT CGCTCAAAGC TTCCGCCGCG CAGCACAGAG GTGGCAGGAA GAATTCCATG AGCGTCAAAT GCCAGAGCAC TTCCAGCCTG CCTCCCCCTC CCGTAGACAC GCACGTAACA GAGGCGTCTC CGTCCAGAAT CCAGAGGGCC GAGTTCCCGG CTCCGGACAG GGCTGCGCCT CAGAAATCGG GCAAGCGTCG GAATTTCTTC CAGCAGATGG CCGCCTCCGC CCTGGACCAC ATTGAGCGCA CGGTCGTGCG GCACATCGAG TCGCAAGTGC CTCTTCCTTC CACCGCGGAT CCTCGCGTGC AACTGGAGGG CAATTTTTCG CCCGTGGAGG AAAGCCCCGT TCAGCACGAG CTCGAAGTGG TGGGCAAACT GCCGGCGAAT CTGCAGGGCG TATATATGAG GAATGGCGCG AATCCGCGGT TCCAACCCGA GGGCGGCCAC CATTTTTTCG ACGGGGATGG CATGATTCAT GCAGTGCGGT TCAAAGACGG GATTGTGAGT CACTGCTCGC GCTTCACGAA AACGTACCGC CTGCGCGTCG AGGAAGAAGA GGGGCATCCG CTCTTCCCGA AAGCCATCGG GGAGTTACAC GGCCACGGCG GGGTGGCTCG TCTAGCCTTA TACTTTGCAC GCAGCTTGGC CGGAATCGTC GACTCGTCCC AAGGGATGGG CGTCGCAAAT GCAGGACTCA TCTACCACAA TGGGCGCCTG CTCGCCATGT CGGAGGACGA TCAGCCGTAC CTGGTGCGCA TTAAGGAGGA CGGCGATCTG GAGACCGTGA GAAAGTTCGA CTTCGACGGC CAGCATCACA AATCGATGAT TGCGCACCCG AAGATCGACC CGGCCACGGG AGAAATGTTC GCGCTGAGCT ACAATCCGCT CATGCCGCCG CATCTCTACT GCTTCCGGGT CGGCCCGGAC GGGAAGAAGG CGCCCGAAGT GGCCATCACG CTGCCGGAGG CGACGATGAT GCACGATTTC GCCATCACCA AGCGCTTCGT GGTGATCCCG GACCAGCAGG TGGTGTTCCG AATGACAGAA ATGCTCAAGG GCGGATCCCC AGTCATCTAC AACCCCGAGA AGATGGCGCG GTACGGCCTG CTGCCCAAGT ACGACAATGA TGAGAGCCGA ATTCAATGGA TTGAGGTGCC GGACTGCTTC TGCTTTCACC TGTGGAATGC GTGGGAGGAG GGCGACGAGG TGGTGGTTCT GGGCTCGTGC ATGACGCCGG CCGATTCCAT CTTCAACGAG TCTGATCAGC CGCTGCGCAG CCTGCTCTCG GAAATTCGCC TCAACACCAC GACGGGCAAA TCGACGCGCA GAGTTCTGGC CGAGACCAAT CTGGAGGCAG GCCAGCTCAA TCGCTCGTAC GTCGGCCAGC AGAACAGATT CTTGTACCTG GCGATCGCCG AGCCCTGGCC CAAGATTTCG GGCATTGCGC GCGTCGATCT GCAGGCAGAG GAAGGCGTTC GCGTGACCAA GCACCTCTAC GAGGACGGCT GCTACGGGGC CGAGCCGGTG TTCGTGCCGC GCACCTCCGA CCCCAATGCG CCGGAGGACG ACGGCTACGT GCTGACTTTC AAGCACAACG AGAAAACCGG TCGATCCGAG CTTCTGGTGC TGGACGCCAG CTCGCCATCG CTGGACCTGC TGGCCACCGT GAAATTGCCC TCCAGAGTCC CCTACGGATT CCACGGGACC TTCGTGAGCG AGGCCGATCT GGCCAAGCAG TCCCTGGAGT GA |
Protein |
| >Mp2g07800.1 MLGLKSASAA SLASITNQST ALAGGHGNLS QQISLKASAA QHRGGRKNSM SVKCQSTSSL PPPPVDTHVT EASPSRIQRA EFPAPDRAAP QKSGKRRNFF QQMAASALDH IERTVVRHIE SQVPLPSTAD PRVQLEGNFS PVEESPVQHE LEVVGKLPAN LQGVYMRNGA NPRFQPEGGH HFFDGDGMIH AVRFKDGIVS HCSRFTKTYR LRVEEEEGHP LFPKAIGELH GHGGVARLAL YFARSLAGIV DSSQGMGVAN AGLIYHNGRL LAMSEDDQPY LVRIKEDGDL ETVRKFDFDG QHHKSMIAHP KIDPATGEMF ALSYNPLMPP HLYCFRVGPD GKKAPEVAIT LPEATMMHDF AITKRFVVIP DQQVVFRMTE MLKGGSPVIY NPEKMARYGL LPKYDNDESR IQWIEVPDCF CFHLWNAWEE GDEVVVLGSC MTPADSIFNE SDQPLRSLLS EIRLNTTTGK STRRVLAETN LEAGQLNRSY VGQQNRFLYL AIAEPWPKIS GIARVDLQAE EGVRVTKHLY EDGCYGAEPV FVPRTSDPNA PEDDGYVLTF KHNEKTGRSE LLVLDASSPS LDLLATVKLP SRVPYGFHGT FVSEADLAKQ SLE |