| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS01044 | Squalene and phytoene synthases signature 1. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00494 | Squalene/phytoene synthase |
| ProSitePatterns | PS01045 | Squalene and phytoene synthases signature 2. |
| SFLD | SFLDS00005 | Isoprenoid Synthase Type I |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| FunFam | G3DSA:1.10.600.10:FF:000004 | Phytoene synthase chloroplastic |
| SFLD | SFLDG01212 | Phytoene synthase like |
| PANTHER | PTHR31480 | BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE |
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| CDD | cd00683 | Trans_IPPS_HH |
| KEGG | K02291 | 15-cis-phytoene synthase [EC:2.5.1.32] |
| KOG | KOG1459 | Squalene synthetase; [I] |
| MapolyID | Mapoly0040s0104 | - |
| GO | GO:0009058 | biosynthetic process |
| GO | GO:0016767 | geranylgeranyl-diphosphate geranylgeranyltransferase activity |
| GO | GO:0004311 | farnesyltranstransferase activity |
| GO | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| GO | GO:0016117 | carotenoid biosynthetic process |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSQS1 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Secondary metabolism enzyme, Terpene biosynthesis enzymes (from nomenclature)
0 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g21100.1 CCCGGACGAC TTTCGATTGC TGCCTTACGC TGATGCTCGG CTTGCGGCTC GCGGCTCGTG GCTCGGAGTG CTCGTCCCAG GCCATCCTTC CCCTCCTTCC CCTCCTTCCT TCGCTCGAGT ACCTTCTTCC GCTGCTGCTG CGCTCTCTCA CTTCACTTCC TGCGCCGGCG AGTTGACTCC GCGTTCTCCA CGTGCTCGAC GTCACCGAGG CCCTGGTGGT GAAGGTGCGT GAGATCGCTG CAGATTGCCA TGGATATTTG ATATCATCCC GGCTACGGCT CCTGCCTGCT CGAGGTCGCC TCCTTCGACG AATTCCTCGA CAGCCAAGAG TTGCGCTCCC CGCTGATTGA TCCTCCGGTA GGTCCCCCGT CTCTTCTCTC TAGCACGGCT CTTTCACTCT CTTGCTGTTC GTACTCCTCG CGCTTGATCG CAGCTTGCCT CTCGAGCTCG CTCTCTCGAG CACGACAGTC TGCGGGAGAC CTTCCTGGCC TATCTGCTCC CCTCGCCGTG CCGAAGATAT TTGCTTAGTA GGGACTCTCT GATTCTCCTC CGTGACCCAG ACGCGCAAGC GGATGATTTG CACCGAGGGA ACACCTTCAC GTGTCCCGGG CCCCCGGACC TAACACAGAG CCCTTTTTTA TGATGCGCAG GCGGCTCGAA ATCACCACAC TCTTCTCGTC CCGCGAAGCA CTTGGAAGGC GCTGAGCTGA ATCCAGTTGA GACCCGTGTC GCGTCGGTGT GTCAAAAATC GGGGAGCTGA GAGAAGGAAG AGGAATCGGC TGTGGCAGGG GGCGTAGACA GCAATGCAGT CTGTGACTTA TGGCAATGTT TACTCGCCCG TCTGCTGGCT ATCGTCGGAC GGGGATCATG TCTCGTCGAG CTCGTCTGAG CTGTTCCAGC AGCGCTCGTC GTCCGGGCTA GGTAGCAGGA AGACGCGCAG GGGGAAGGCG CTGTCAGTGA CTCGACCCTG CGGGGGAAGG GCAGCTTTGG GGCTGGGGCC GTCTTCCGTC GTCGTGGGGC CGACTGCCCG CGAGCGAAGC ACGCTCAGGG TGCTGTCGTC GCTCGTCACC GACCCTTCCG GAAGGTCGAT GCTCTCGGCG GAGCAGAAGG TTTTCGACGT GGTGGCCAAG CAGGCGTCAA TGCTGGAGGA GCAGCAGAAA CGAGGCACCA GCCTCGTCGA CGTGGAGCTC GGCTCGTCCA CCATGGGCTC TCCCGAGCTG CTCAGTGACG CCTACGCTCG TTGTGGAGAA GTGTGCGCCG AATACGCAAA AACGTTCTAT CTCGGTATGC GTTCCCCTCC TTTTCTTCTT GTGAGTCGCT CTTTGCGTCC TGTCACATTC TTGCACGCCC CCGTTGTGCT CTCTAATCGC CATGGACACG TCCATCGGTC TTCCCTCGAC ATTCTGTCAC ATGAGCGGAT CTTTGTCGTC TCTTTGTGGG GTGGCCTACA GTCTGTCCGT GCCATCGGTG TTTCTGCTTA CCGTTGAACG CAATGTTTGA GGATTCCTTC GTGTCTCCGG AGGACACGGT CTTGTGATGA ATCTCTCCAC AGTAGCGCGG AATCTTAAGG GTTCCGTCCA TAGCCTGAGA AGATTGCTGT TGGTCATACA CAGGGTTGGG TCTGTAGCTT CGTTCATCAG TTTTAAAATA ACATTTTGTG ATTTCATTAT GTGCAGGAAC GAAGCTGATG ACTCCTGAAA GGCAACGAGC AATTTGGGCT ATATATGGTG AGTGTGGCCC TGAAAACTTG CTCTTTCTGT GAGAACGGAT AGGATGCGGT TTGATAGTGT CCAATTTGGT GCGGACAAGT TTCATTTTGT GGGGATTTTT CTGATTTTGT TTGCGTATTA TTCGCCGCCT TTTCTCACGG CTGGTTGAAC GAATTTTGTG CCGAATTCCG GTAATTAAGG CGGCAGTCAA GATCCCTAGA AACACGGGTT GTCTACTTCG TTTGGCGGAA TAGTTCCTGT GTAGATTCTT ACAATCTTAG ACGAGTGAAT TGTCTTCGAG GACGATTTAA AACCTTCGAA ATCTCTGGCT ACTGTCTTCC GGTTGCATCC CCGAGTGTAG AAAAAGTGTC TTTAACGAGC ACTCGTTGAT CATTGACTAC CACAATGCTT AGATCGAAAG TGGCACCACG CCTGAACTTC TTTCTGAATT TCGTGCTACA GTCTGGTGCA GAAGAACTGA CGAACTCGTG GACGGTCCAA ATGCCTCTCG AATCACTCCC ACCGCCCTCG ATCGATGGGA GGAGAGGTTG GAGGATATTT TCCGCGGCCA GCCTTACGAC ATGTTGGATG CCGCACTTTC GGACACCGTC TCGAGATTTC CTGTGGACAT TCAGGTACTT TTTCTAAGCT GTTTTACACG ACCAATGATG GAAACTGGTG TGCTAGTTTT CATGAAGTGT AGGAAACTTG TATAATAATT TTTCATGACT AAACTCTGTC CAAAGCGCTT CCAGTATCAC CGTGCACGAA CTGCAGTCTC AGTTGCACTT TGGTCATTTT TATAATCTTC TACAGCGGGA GTCTAATGGT TTTGATCTAT TTGCAGCCCT TCCGAGACAT GATTGATGGC ATGCGTATGG ACCTGGTGAA ATCACGCTAC AACAACTTTG ATGAGTTGTA CTTGTACTGC TACAACGTGG CCGGCACCGT CGGGCTCATG AGCGTTCCTG TGATGGGTAT AGACCCTGAC TCGAAAGCCA CAACCGAAAG TGTCTACAGT GCCGCCCTTG CCTTGGGAAT TGCAAACCAG TTGACGAATA TTCTGCGAGA CGTCGGCGAA GAGTGAGTTT CTTTTAACTT AACAACAACT TAACTGCTCT TATGAATAAT AGGGCCGAGC AGTCATTTTG TCATATTTTT TCAGATTTAC CTACAGCGCC ATCAAGTGAT ATAGGTTGTT TTTTTCCTGT AGACTTTGAA TGCACTTTCA CCTGAACTTG CAAAAGCCTC TGCGCTATTC CACATGAGTT GCTATAAGTC TTAGTTCCGA GAATCTCTCT TTTCATGTTT GGGCTGCCAA GTGAAGGAGC GGAACAGAAC GTGTGGTGGG GTCGGATCTA CTCTCGTAGA TATTATGCAC GATAATCAAG CATTTTGTGT CTTCTAACTT GTCATATTAT ACTGCAGTGC CCGAAGAAGG CGTATCTACT TGCCACAAGA CGAGCTCACT CGATTCGGAA TCACTGATGA GGATATTTTT GCCGGAGTTG TCACGGACAA GTGGAGAGCT TTCATGAAGG ATCAAATTCG TCGAGCACGC ATGTTTTTCA CTGAGGCCGA GAAGGGAGTC GTAGAACTCG ATAAGGACAG TCGATGGCCG GTACGTTTTG CCTACATGCC CTCAGGAACA CCGTTGTAAA CTTTGTTGCC ATCCAATGTT AGCCATCGCT ATCGATTGAA TTTTTCATCC AGTCAAGGTG TCCCAAGTCG AACAGGGAGG TAATGTGGTT GTGAGAGGCA AGTAAATTAT CTCCTGAACG TGGATAATAG TCGGCGTGCA TACCATTTAA TGTTTTACTC TAAGTGGCTC ATGATGATTG TGCCCCAAGG TCTGACATGT AGACTAAGCT ATTTGTCTCG GGTCAATCGC AGGTGTGGGC ATCGTTGATT CTTTATCGTC AAATTTTGGA TGCCATTGAA GCAAATGACT ACAACAACTT CACCAAGCGT GCATACGTTG GAAAAGCCAA GAAATTGTTG CTGCTGCCAG CGGCGTACGC CAGAGCTCTC GTTGCTCCTC CCTCTTCGAA ACAAAGGCTT AGCAGAGTTT AACGGCCTTT CAATTTTTTC GCATGTCTCT TTCGAGCATG TCCTGTGTAA AAGTACGTTG ACCCTTTGAA ATACCTGACC TAATGGCCGT TCTCGAGAAA ATAGATCTCG GTTCCTCCGA GGAAGAAAAA TCATTGTAGA ATAAGTAGAT TCTTTACCAT GTAGTGGTTC TAGATACTCA TTCTGGTCAA AATTCAATCA AGCCTTTAGG AGGAAATTGG TCGTTCGTCC AATTTATATG GCCCTACGAA TGCTGTGGAT TAACCCTTTG TCAGCTGCGG CCTTTCACTG GTAAATCCAA TGTAATATAT CACCCCAGGA AAAAAGTACG AAATGGATTT CTTTTAGCCA CTCTCAGTGA GAACTATTGA GGAAACTTGC AATGTGTCCG AGTGTCAGCT CGGTTGAATA TCACGGTTAT ATTTAACGTT CCCGCCGCCT TTATTATCAC TAGAATGTAA GTAGATCATG CCGATATTTC AATAAACCTG G |
mRNA UTR + CDS |
| >Mp2g21100.1 CCCGGACGAC TTTCGATTGC TGCCTTACGC TGATGCTCGG CTTGCGGCTC GCGGCTCGTG GCTCGGAGTG CTCGTCCCAG GCCATCCTTC CCCTCCTTCC CCTCCTTCCT TCGCTCGAGT ACCTTCTTCC GCTGCTGCTG CGCTCTCTCA CTTCACTTCC TGCGCCGGCG AGTTGACTCC GCGTTCTCCA CGTGCTCGAC GTCACCGAGG CCCTGGTGGT GAAGGTGCGT GAGATCGCTG CAGATTGCCA TGGATATTTG ATATCATCCC GGCTACGGCT CCTGCCTGCT CGAGGTCGCC TCCTTCGACG AATTCCTCGA CAGCCAAGAG TTGCGCTCCC CGCTGATTGA TCCTCCGGCG GCTCGAAATC ACCACACTCT TCTCGTCCCG CGAAGCACTT GGAAGGCGCT GAGCTGAATC CAGTTGAGAC CCGTGTCGCG TCGGTGTGTC AAAAATCGGG GAGCTGAGAG AAGGAAGAGG AATCGGCTGT GGCAGGGGGC GTAGACAGCA ATGCAGTCTG TGACTTATGG CAATGTTTAC TCGCCCGTCT GCTGGCTATC GTCGGACGGG GATCATGTCT CGTCGAGCTC GTCTGAGCTG TTCCAGCAGC GCTCGTCGTC CGGGCTAGGT AGCAGGAAGA CGCGCAGGGG GAAGGCGCTG TCAGTGACTC GACCCTGCGG GGGAAGGGCA GCTTTGGGGC TGGGGCCGTC TTCCGTCGTC GTGGGGCCGA CTGCCCGCGA GCGAAGCACG CTCAGGGTGC TGTCGTCGCT CGTCACCGAC CCTTCCGGAA GGTCGATGCT CTCGGCGGAG CAGAAGGTTT TCGACGTGGT GGCCAAGCAG GCGTCAATGC TGGAGGAGCA GCAGAAACGA GGCACCAGCC TCGTCGACGT GGAGCTCGGC TCGTCCACCA TGGGCTCTCC CGAGCTGCTC AGTGACGCCT ACGCTCGTTG TGGAGAAGTG TGCGCCGAAT ACGCAAAAAC GTTCTATCTC GGAACGAAGC TGATGACTCC TGAAAGGCAA CGAGCAATTT GGGCTATATA TGTCTGGTGC AGAAGAACTG ACGAACTCGT GGACGGTCCA AATGCCTCTC GAATCACTCC CACCGCCCTC GATCGATGGG AGGAGAGGTT GGAGGATATT TTCCGCGGCC AGCCTTACGA CATGTTGGAT GCCGCACTTT CGGACACCGT CTCGAGATTT CCTGTGGACA TTCAGCCCTT CCGAGACATG ATTGATGGCA TGCGTATGGA CCTGGTGAAA TCACGCTACA ACAACTTTGA TGAGTTGTAC TTGTACTGCT ACAACGTGGC CGGCACCGTC GGGCTCATGA GCGTTCCTGT GATGGGTATA GACCCTGACT CGAAAGCCAC AACCGAAAGT GTCTACAGTG CCGCCCTTGC CTTGGGAATT GCAAACCAGT TGACGAATAT TCTGCGAGAC GTCGGCGAAG ATGCCCGAAG AAGGCGTATC TACTTGCCAC AAGACGAGCT CACTCGATTC GGAATCACTG ATGAGGATAT TTTTGCCGGA GTTGTCACGG ACAAGTGGAG AGCTTTCATG AAGGATCAAA TTCGTCGAGC ACGCATGTTT TTCACTGAGG CCGAGAAGGG AGTCGTAGAA CTCGATAAGG ACAGTCGATG GCCGGTGTGG GCATCGTTGA TTCTTTATCG TCAAATTTTG GATGCCATTG AAGCAAATGA CTACAACAAC TTCACCAAGC GTGCATACGT TGGAAAAGCC AAGAAATTGT TGCTGCTGCC AGCGGCGTAC GCCAGAGCTC TCGTTGCTCC TCCCTCTTCG AAACAAAGGC TTAGCAGAGT TTAACGGCCT TTCAATTTTT TCGCATGTCT CTTTCGAGCA TGTCCTGTGT AAAAGTACGT TGACCCTTTG AAATACCTGA CCTAATGGCC GTTCTCGAGA AAATAGATCT CGGTTCCTCC GAGGAAGAAA AATCATTGTA GAATAAGTAG ATTCTTTACC ATGTAGTGGT TCTAGATACT CATTCTGGTC AAAATTCAAT CAAGCCTTTA GGAGGAAATT GGTCGTTCGT CCAATTTATA TGGCCCTACG AATGCTGTGG ATTAACCCTT TGTCAGCTGC GGCCTTTCAC TGGTAAATCC AATGTAATAT ATCACCCCAG GAAAAAAGTA CGAAATGGAT TTCTTTTAGC CACTCTCAGT GAGAACTATT GAGGAAACTT GCAATGTGTC CGAGTGTCAG CTCGGTTGAA TATCACGGTT ATATTTAACG TTCCCGCCGC CTTTATTATC ACTAGAATGT AAGTAGATCA TGCCGATATT TCAATAAACC TGG |
CDS |
| >Mp2g21100.1 ATGCAGTCTG TGACTTATGG CAATGTTTAC TCGCCCGTCT GCTGGCTATC GTCGGACGGG GATCATGTCT CGTCGAGCTC GTCTGAGCTG TTCCAGCAGC GCTCGTCGTC CGGGCTAGGT AGCAGGAAGA CGCGCAGGGG GAAGGCGCTG TCAGTGACTC GACCCTGCGG GGGAAGGGCA GCTTTGGGGC TGGGGCCGTC TTCCGTCGTC GTGGGGCCGA CTGCCCGCGA GCGAAGCACG CTCAGGGTGC TGTCGTCGCT CGTCACCGAC CCTTCCGGAA GGTCGATGCT CTCGGCGGAG CAGAAGGTTT TCGACGTGGT GGCCAAGCAG GCGTCAATGC TGGAGGAGCA GCAGAAACGA GGCACCAGCC TCGTCGACGT GGAGCTCGGC TCGTCCACCA TGGGCTCTCC CGAGCTGCTC AGTGACGCCT ACGCTCGTTG TGGAGAAGTG TGCGCCGAAT ACGCAAAAAC GTTCTATCTC GGAACGAAGC TGATGACTCC TGAAAGGCAA CGAGCAATTT GGGCTATATA TGTCTGGTGC AGAAGAACTG ACGAACTCGT GGACGGTCCA AATGCCTCTC GAATCACTCC CACCGCCCTC GATCGATGGG AGGAGAGGTT GGAGGATATT TTCCGCGGCC AGCCTTACGA CATGTTGGAT GCCGCACTTT CGGACACCGT CTCGAGATTT CCTGTGGACA TTCAGCCCTT CCGAGACATG ATTGATGGCA TGCGTATGGA CCTGGTGAAA TCACGCTACA ACAACTTTGA TGAGTTGTAC TTGTACTGCT ACAACGTGGC CGGCACCGTC GGGCTCATGA GCGTTCCTGT GATGGGTATA GACCCTGACT CGAAAGCCAC AACCGAAAGT GTCTACAGTG CCGCCCTTGC CTTGGGAATT GCAAACCAGT TGACGAATAT TCTGCGAGAC GTCGGCGAAG ATGCCCGAAG AAGGCGTATC TACTTGCCAC AAGACGAGCT CACTCGATTC GGAATCACTG ATGAGGATAT TTTTGCCGGA GTTGTCACGG ACAAGTGGAG AGCTTTCATG AAGGATCAAA TTCGTCGAGC ACGCATGTTT TTCACTGAGG CCGAGAAGGG AGTCGTAGAA CTCGATAAGG ACAGTCGATG GCCGGTGTGG GCATCGTTGA TTCTTTATCG TCAAATTTTG GATGCCATTG AAGCAAATGA CTACAACAAC TTCACCAAGC GTGCATACGT TGGAAAAGCC AAGAAATTGT TGCTGCTGCC AGCGGCGTAC GCCAGAGCTC TCGTTGCTCC TCCCTCTTCG AAACAAAGGC TTAGCAGAGT TTAA |
Protein |
| >Mp2g21100.1 MQSVTYGNVY SPVCWLSSDG DHVSSSSSEL FQQRSSSGLG SRKTRRGKAL SVTRPCGGRA ALGLGPSSVV VGPTARERST LRVLSSLVTD PSGRSMLSAE QKVFDVVAKQ ASMLEEQQKR GTSLVDVELG SSTMGSPELL SDAYARCGEV CAEYAKTFYL GTKLMTPERQ RAIWAIYVWC RRTDELVDGP NASRITPTAL DRWEERLEDI FRGQPYDMLD AALSDTVSRF PVDIQPFRDM IDGMRMDLVK SRYNNFDELY LYCYNVAGTV GLMSVPVMGI DPDSKATTES VYSAALALGI ANQLTNILRD VGEDARRRRI YLPQDELTRF GITDEDIFAG VVTDKWRAFM KDQIRRARMF FTEAEKGVVE LDKDSRWPVW ASLILYRQIL DAIEANDYNN FTKRAYVGKA KKLLLLPAAY ARALVAPPSS KQRLSRV |