Mp2g24200



Description

Annotation

Database ID Description
SMART SM00389 HOX_1
ProSitePatterns PS00027 'Homeobox' domain signature.
Pfam PF00046 Homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS50071 'Homeobox' domain profile.
FunFam G3DSA:1.10.10.60:FF:000577 Homeobox-leucine zipper protein 18
CDD cd00086 homeodomain
Coils Coil Coil
Pfam PF02183 Homeobox associated leucine zipper
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04618 HD-ZIP protein N terminus
SMART SM00340 halz
PANTHER PTHR45714 HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14
KEGG K09338 homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; [K]
MapolyID Mapoly0069s0069 -
GO GO:0043565 sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpC2HDZ transcription factor, HD, homeodomain protein Published
MpHD14 transcription factor, HD, homeodomain protein Published

Associated Literature (AI-based literature mining, Beta-version)

MpC2HDZ, an auxin-responsive transcription factor gene, was used and validated by RT-qPCR and RNA-seq as an auxin response readout, showing upregulation under all conditions and reduced expression in Mptir1 knockout cells.

1 core 3 peripheral

Suzuki, H., et al. (2023) · Plant Cell  research experimental subject
MpC2HDZ, an auxin-responsive transcription factor gene, was used and validated by RT-qPCR and RNA-seq as an auxin response readout, showing upregulation under all conditions and reduced expression in Mptir1 knockout cells.
Wallner ES, Edelbacher N, Dolan L. (2026) · Current biology : CB  research experimental comparator
Class II HD-Zip, a known auxin-responsive gene; its transcript levels measured by qPCR as an auxin-response readout.
Flores-Sandoval, E., et al. (2018b) · Frontiers in Plant Science  research experimental background
Auxin-inducible class II HD-ZIP gene reported with logFC/logCPM values in expression analysis; measured only, not functionally tested.
Csicsely, E., et al. (2025) · The Plant Journal  research experimental background
Class II HD-Zip (Mp2g24200); down, putative miRNA target.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g24200.1 chr2:29288508..29291627 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.