Mp4g01560



Description

Annotation

Database ID Description
PANTHER PTHR31499 MYB FAMILY TRANSCRIPTION FACTOR PHL11
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
Pfam PF00249 Myb-like DNA-binding domain
Gene3D G3DSA:1.10.10.60 -
Pfam PF14379 MYB-CC type transfactor, LHEQLE motif
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
FunFam G3DSA:1.10.10.60:FF:000002 Myb family transcription factor
MapolyID Mapoly0098s0044 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGARP3 transcription factor, GARP Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, GARP (from nomenclature)

0 core 1 peripheral

Rico-Reséndiz, F., et al. (2020) · International Journal of Molecular Sciences  research sequence comparator
PHR family member identified phylogenetically, placed in a different subclade from MpPHR1 and not up-regulated under Pi stress.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01560.1 chr4:1920822..1927974 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.