Mp5g05940



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR31832 B-BOX ZINC FINGER PROTEIN 22
ProSiteProfiles PS50119 Zinc finger B-box type profile.
Pfam PF00643 B-box zinc finger
CDD cd19821 Bbox1_BBX-like
FunFam G3DSA:3.30.160.60:FF:000610 B-box zinc finger protein 19
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
SMART SM00336 bboxneu5
MapolyID Mapoly0027s0033 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0009640 photomorphogenesis
GO GO:0005634 nucleus
GO GO:0008270 zinc ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBBX1 transcription factor, BBX Published

Associated Literature (AI-based literature mining, Beta-version)

B-box transcription factor; MpBBX1 and MpBBX5 act antagonistically to control thallus flatness downstream of light signaling.

1 core 1 peripheral

Roetzer J, Asper B, Meir Z, Edelbacher N, Merai Z, Datta S, Dolan L. (2026) · Current biology : CB  research experimental subject
B-box transcription factor; MpBBX1 and MpBBX5 act antagonistically to control thallus flatness downstream of light signaling.
Lagercrantz, U., et al. (2021) · New Phytologist  research experimental background
CONSTANS-like (Mp5g05940); rhythmic clock-output gene.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g05940.1 chr5:7961495..7965815 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.