Mp5g10600



Description

Annotation

Database ID Description
SUPERFAMILY SSF52833 Thioredoxin-like
CDD cd03419 GRX_GRXh_1_2_like
Gene3D G3DSA:3.40.30.10 Glutaredoxin
Pfam PF00462 Glutaredoxin
PANTHER PTHR10168 GLUTAREDOXIN
NCBIfam TIGR02189 glutaredoxin-like family
ProSiteProfiles PS51354 Glutaredoxin domain profile.
KEGG K03676 glutaredoxin 3
KOG KOG1752 Glutaredoxin and related proteins; [O]
MapolyID Mapoly0048s0012 -

Nomenclature

Gene symbol Product Transcript ID Status
MpROXY1 CC-type GRX Published

Associated Literature (AI-based literature mining, Beta-version)

Functionally studied ROXY glutaredoxin: complemented Arabidopsis roxy1-2 flower defect, interacted with MpTGA/PAN by Y2H, BiFC and FRET-FLIM (C-terminal deletion MpROXY1Δ14 abolished binding), and gave redox-dependent supershift on the as-1-like motif by EMSA. Overexpression in M. polymorpha caused severe growth defects requiring active-site cysteines, and GFP fusions colocalized with active RNAPII; shown conserved with Arabidopsis ROXY1.

1 core 0 peripheral

Gutsche, N., et al. (2017) · Plant Direct  research experimental subject
Functionally studied ROXY glutaredoxin: complemented Arabidopsis roxy1-2 flower defect, interacted with MpTGA/PAN by Y2H, BiFC and FRET-FLIM (C-terminal deletion MpROXY1Δ14 abolished binding), and gave redox-dependent supershift on the as-1-like motif by EMSA. Overexpression in M. polymorpha caused severe growth defects requiring active-site cysteines, and GFP fusions colocalized with active RNAPII; shown conserved with Arabidopsis ROXY1.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g10600.1 chr5:14280998..14283665 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.