Mp8g16320



Description

Annotation

Database ID Description
SMART SM00220 serkin_6
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50112 PAS repeat profile.
Gene3D G3DSA:3.30.450.20 PAS domain
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
NCBIfam TIGR00229 PAS domain S-box protein
SMART SM00091 pas_2
FunFam G3DSA:3.30.200.20:FF:000060 Serine/threonine-protein kinase isoform 1
Pfam PF14381 Ethylene-responsive protein kinase Le-CTR1
PANTHER PTHR23257 SERINE-THREONINE PROTEIN KINASE
PRINTS PR00109 Tyrosine kinase catalytic domain signature
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
CDD cd00130 PAS
Pfam PF07714 Protein tyrosine and serine/threonine kinase
CDD cd13999 STKc_MAP3K-like
ProSiteProfiles PS50011 Protein kinase domain profile.
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
FunFam G3DSA:1.10.510.10:FF:000476 PAS domain-containing protein tyrosine kinase family protein
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Pfam PF00989 PAS fold
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
KEGG K14510 serine/threonine-protein kinase CTR1 [EC:2.7.11.1]
KEGG K04424 sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]
KOG KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [T]
MapolyID Mapoly0154s0032 -
GO GO:0005524 ATP binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0007165 signal transduction
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpCTR3 Potential negative regulator of ethylene signal transduction pathway. Hormone related protein, Ethylene related protein, MAP-kinase, MAPKKK Published

Associated Literature (AI-based literature mining, Beta-version)

A group B3 Raf kinase (Mapoly0154s0032/Mp8g16320, 1294 aa, with PAS, EDR1 and kinase domains) functionally studied here as the principal positive regulator of ABA signaling. Mpark1ge mutants lost gemma dormancy (rhizoids germinated in gemma cups) and showed reduced ABA-induced LEAL/MpABI3 expression; effects were amplified in double mutants.

1 core 0 peripheral

Jahan, A., et al. (2022) · Frontiers in Plant Science  research experimental subject
A group B3 Raf kinase (Mapoly0154s0032/Mp8g16320, 1294 aa, with PAS, EDR1 and kinase domains) functionally studied here as the principal positive regulator of ABA signaling. Mpark1ge mutants lost gemma dormancy (rhizoids germinated in gemma cups) and showed reduced ABA-induced LEAL/MpABI3 expression; effects were amplified in double mutants.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g16320.1 chr8:21109201..21119653 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.