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The Marchantia pangenome reveals ancient mechanisms of plant adaptation to the environment.

Beaulieu, C., et al. · 2025 · Nature Genetics   research

doi:10.1038/s41588-024-02071-4   PMID:39962240   PMC11906373

Linked genes (11)  0 core 11 peripheral

Gene ID	Name	Evidence / Role	Function (this paper)
Mp6g05430	MpTPS1	sequence comparator	Terpenoid synthase in orthogroups containing genes under balancing selection shared across bryophytes and angiosperms.
Mp6g05950	MpTPS4	sequence comparator	Terpenoid synthase in orthogroups containing genes under balancing selection shared across bryophytes and angiosperms.
Mp8g04680	missing	sequence background	ABC1 atypical kinase identified in a chromosome 8 locus from GEA linked to temperature/precipitation. Among the top 16% of genes under balancing selection (CDS and promoter); orthologous to A. thaliana ABC1K7.
Mp8g04690	missing	sequence background	Cytochrome C1 protein co-located with the ABC1K gene in the GEA-identified chromosome 8 locus associated with environmental variables.
Mp3g02320	MpC1HDZ	citation background	Not mentioned in the retrievable article body; cited as a previously characterized Marchantia gene within the comparative conserved-HOG framing. No findings asserted in this paper.
Mp8g17530	MpCSLD10	sequence background	Cellulose synthase gene found among orthogroups showing strong background selection across bryophytes and angiosperms.
—	MpFERONIA missing	sequence background	CrRLK1L-family receptor-like kinase in orthogroups under background selection; noted as crucial for Marchantia and angiosperm development.
Mp6g04830	MpGCAM1	citation background	Cited as a gene functionally characterized in M. polymorpha Tak-1, clustering in shared Marchantia HOGs, indicating gemma cup formation mechanisms are conserved across the Marchantia genus.
Mp4g08790	MpNBS-LRR11	sequence background	Coiled-coil NLR (Mp4g08790) differentially expressed under abiotic stress and pathogen infection; locus detected in GEA for hot/humid bioclimatic variables, suggesting a role in pathogen adaptation.
Mp5g17500	MpPOD128	sequence background	Peroxidase (Mp5g17500) detected as an additional GEA locus; peroxidases discussed as families under balancing selection shared across bryophytes and angiosperms.
—	MpTHESEUS missing	sequence background	Receptor-like kinase in orthogroups under background selection, conserved across plant lineages and crucial for Marchantia/angiosperm development.