Mp1g06880



Description

Annotation

Database ID Description
PANTHER PTHR46009 VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG
Pfam PF04652 Vta1 like
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF18097 Vta1 C-terminal domain
Gene3D G3DSA:1.25.40.270 -
Gene3D G3DSA:1.20.5.420 Immunoglobulin FC, subunit C
KEGG K12199 vacuolar protein sorting-associated protein VTA1
KOG KOG0917 Uncharacterized conserved protein; [S]
MapolyID Mapoly0043s0080 -
GO GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway
GO GO:0005771 multivesicular body

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Tested as a co-localization and interaction partner of MpSPI PBW; yeast two-hybrid showed a strong interaction that could not be independently confirmed.

0 core 2 peripheral

Koebke, E., et al. (2022) · Frontiers in Plant Science  research experimental comparator
Tested as a co-localization and interaction partner of MpSPI PBW; yeast two-hybrid showed a strong interaction that could not be independently confirmed.
Westermann, J., et al. (2020) · Frontiers in Plant Science  research experimental tool
Negative control in BiFC; its co-expression yields no YFP signal, confirming assay specificity.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06880.1 chr1:7404473..7409613 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.