Mp4g07110



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR13027 SAND PROTEIN-RELATED
Pfam PF19038 Third Longin domain of FUZ, MON1 and HPS1
PRINTS PR01546 Saccharomyces cerevisiae 73.5kDa hypothetical protein signature
Pfam PF19036 First Longin domain of FUZ, MON1 and HPS1
Pfam PF19037 Second Longin domain of FUZ, MON1 and HPS1
KEGG K20195 vacuolar fusion protein MON1
KOG KOG0997 Uncharacterized conserved protein Sand; N-term missing; [S]
MapolyID Mapoly0115s0070 -
GO GO:0016192 vesicle-mediated transport
GO GO:0006623 protein targeting to vacuole

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Used as a reference (housekeeping) gene; its expression contributed to the geometric mean for qRT-PCR normalization.

0 core 5 peripheral

Hernández-García, J., et al. (2024a) · Nature Communications  research experimental tool
Used as a reference (housekeeping) gene; its expression contributed to the geometric mean for qRT-PCR normalization.
Saint-Marcoux, D., et al. (2015) · PLoS ONE  research experimental tool
Candidate reference gene suitable for development and abiotic stress but elevated after hormone treatments.
Woudenberg, S., et al. (2024) · Development  research experimental tool
Used as an RT-qPCR reference gene (geometric mean of MpSAND/MpAPT7/MpAPT3) to normalize MpARF1 expression.
Das, S., et al. (2024) · Plant Communications  research experimental tool
Housekeeping gene used as a reference for transcript-level normalization.
Bonnot, C., et al. (2017) · New Phytologist  research experimental tool
SAND-family reference gene.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g07110.1 chr4:9453710..9461421 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g07110.2 chr4:9453710..9461421 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.