Mp4g20600



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.10.60:FF:000007 Two-component response regulator
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00072 Response regulator receiver domain
PANTHER PTHR43874 TWO-COMPONENT RESPONSE REGULATOR
CDD cd17584 REC_typeB_ARR-like
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SMART SM00448 REC_2
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
SUPERFAMILY SSF52172 CheY-like
ProSiteProfiles PS50110 Response regulatory domain profile.
Gene3D G3DSA:3.40.50.2300 -
Pfam PF00249 Myb-like DNA-binding domain
KEGG K14491 two-component response regulator ARR-B family
KOG KOG1601 GATA-4/5/6 transcription factors; C-term missing; [K]
MapolyID Mapoly0101s0006 -
GO GO:0009736 cytokinin-activated signaling pathway
GO GO:0000160 phosphorelay signal transduction system
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRRB cytokinin response regulator, type-B; transcription factor, GARP Published

Associated Literature (AI-based literature mining, Beta-version)

Type-B response regulator central to cytokinin signaling; knockout lines show defective gemma cup formation and increased rhizoids. Indirectly upregulates MpGCAM1 and drives expression of nitrogen-transport and auxin-related genes; active at the apical notch of young thalli.

4 core 3 peripheral

Bao, H., et al. (2024) · Current Biology  research experimental subject
Type-B response regulator; downstream of MpCKI1/MpHPT two-component signaling.
Aki, S. S., et al. (2022) · Scientific Reports  research experimental subject
Type-B response regulator central to cytokinin signaling; knockout lines show defective gemma cup formation and increased rhizoids. Indirectly upregulates MpGCAM1 and drives expression of nitrogen-transport and auxin-related genes; active at the apical notch of young thalli.
Aki, S. S., et al. (2019a) · Plant & Cell Physiology  research experimental subject
Type-B response regulator (Mapoly0101s0006); essential for cytokinin-mediated organ formation; MpRRB-dependent responses.
Aki, S. S., et al. (2019b) · Plant Signaling & Behavior  research experimental subject
Type-B response regulator (single RRB in M. polymorpha); nuclear-localized; cytokinin two-component signaling coordinates development of diverse organs. Mprrb knockout and MpRRB-Citrine analyzed.
Kato, H., et al. (2020b) · New Phytologist  research citation background
Review: type-B response regulator in cytokinin-regulated gemma cup formation.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g20600.1 chr4:27801701..27805492 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g20600.2 chr4:27801701..27806052 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.