Mp5g21220



Description

Annotation

Database ID Description
Coils Coil Coil
CDD cd00609 AAT_like
SUPERFAMILY SSF53383 PLP-dependent transferases
FunFam G3DSA:3.40.640.10:FF:000033 Aspartate aminotransferase
Gene3D G3DSA:3.40.640.10 -
ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.
Pfam PF00155 Aminotransferase class I and II
PANTHER PTHR46383 ASPARTATE AMINOTRANSFERASE
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1
KEGG K15849 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [EC:2.6.1.1 2.6.1.78 2.6.1.79]
KEGG K00812 aspartate aminotransferase [EC:2.6.1.1]
KOG KOG0257 Kynurenine aminotransferase, glutamine transaminase K; [E]
MapolyID Mapoly0058s0104 -
GO GO:0009058 biosynthetic process
GO GO:0003824 catalytic activity
GO GO:0030170 pyridoxal phosphate binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPAT Secondary metabolism enzyme Provisional

Associated Literature (AI-based literature mining, Beta-version)

Secondary metabolism enzyme (from nomenclature)

0 core 3 peripheral

Chini, A., et al. (2021) · Plant Physiology  research experimental comparator
OPDA-responsive marker gene assayed by qPCR alongside MpDIR/MpBHLH4; J4 dampens its OPDA induction.
Kaji, T., et al. (2024) · iScience  research experimental tool
Patatin-like jasmonate-signaling marker gene measured by RT-qPCR to read out hormone-induced responses.
Monte, I., et al. (2020) · Current Biology  research experimental background
MpPAT heat-responsive gene (expression analysis)

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21220.1 chr5:26822172..26827265 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.