Mp5g21680



Description

Annotation

Database ID Description
PANTHER PTHR11771 LIPOXYGENASE
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
Pfam PF01477 PLAT/LH2 domain
Gene3D G3DSA:4.10.375.10 -
Pfam PF00305 Lipoxygenase
SUPERFAMILY SSF48484 Lipoxigenase
ProSiteProfiles PS50095 PLAT domain profile.
ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1.
Gene3D G3DSA:4.10.372.10 -
Gene3D G3DSA:1.20.245.10 -
PRINTS PR00468 Plant lipoxygenase signature
PRINTS PR00087 Lipoxygenase signature
SMART SM00308 LH2_4
ProSiteProfiles PS51393 Lipoxygenase iron-binding catalytic domain profile.
Gene3D G3DSA:2.60.60.20 PLAT/LH2 domain
Gene3D G3DSA:3.10.450.60 -
MapolyID Mapoly0106s0031 -
GO GO:0046872 metal ion binding
GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO GO:0005515 protein binding
GO GO:0034440 lipid oxidation
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpLOX4 Lipoxygenase Published

Associated Literature (AI-based literature mining, Beta-version)

Lipoxygenase, wound-inducible in an MpERF15-dependent manner; repressed in MpERF15OE lines and likely active in the OPDA biosynthetic pathway.

1 core 1 peripheral

Liang, Y., et al. (2022) · Science Advances  research experimental subject
Lipoxygenase, wound-inducible in an MpERF15-dependent manner; repressed in MpERF15OE lines and likely active in the OPDA biosynthetic pathway.
Kneeshaw, S., et al. (2022) · PNAS  research experimental tool
Wound-responsive lipoxygenase gene (Mp5g21680) used as a marker in qPCR expression analyses.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21680.1 chr5:27686212..27691739 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.