Mp5g24070



Description

Annotation

Database ID Description
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains
Gene3D G3DSA:3.90.25.10 -
CDD cd05255 SQD1_like_SDR_e
Gene3D G3DSA:3.40.50.720 -
PANTHER PTHR43000 DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED
Pfam PF01370 NAD dependent epimerase/dehydratase family
KEGG K06118 UDP-sulfoquinovose synthase [EC:3.13.1.1]
KOG KOG1371 UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [M]
MapolyID Mapoly0010s0049 -
GO GO:0009247 glycolipid biosynthetic process
GO GO:0046506 sulfolipid biosynthetic process
GO GO:0046507 UDPsulfoquinovose synthase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSQD lipid turnover protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

lipid turnover protein (from nomenclature)

0 core 2 peripheral

Rico-Reséndiz, F., et al. (2020) · International Journal of Molecular Sciences  research sequence comparator
Sulfolipid (SQDG) biosynthesis enzyme; single homolog identified phylogenetically with conserved distribution across plant lineages.
Shimojo, M., et al. (2023) · Planta  research experimental background
SQDG synthase; qPCR showed induced expression under Pi and N starvation, correlating with SQDG accumulation.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g24070.1 chr5:30572838..30575585 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g24070.2 chr5:30572890..30575275 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.