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SWI3A/B regulates the transition from vegetative to reproductive phase in the liverwort Marchantia polymorpha.

Lozano-Quiles M, Raval PK, Rensing SA, Gould SB. · 2026 · Plant Reproduction   research

doi:10.1007/s00497-026-00537-5   PMID:42159614   PMC13190419

Linked genes (25)  1 core 24 peripheral

Gene ID Name Evidence / Role Function (this paper)
Mp8g15610 MpSWI3A/B experimental subject Main subject. A CRISPR promoter mutation in MpSWI3A/B (Mp8g15610; aka Mapoly0079s0052), a SWI/SNF chromatin-remodeling complex subunit, disrupted male gametangiophore development and spermiogenesis while amplifying vegetative (asexual) propagation, identifying it as a regulator balancing the vegetative-to-reproductive transition.
Mp6g07660 missing experimental background Flagellar radial spoke protein homolog; upregulated DEG in swi3a/boe-male mutants.
Mp8g18310 MpBELL1 experimental background BELL-like homeobox transcription factor; upregulated DEG in swi3a/boe-male mutants.
Mp8g07680 MpBELL4 experimental background BELL-like homeobox transcription factor; downregulated DEG in swi3a/boe-male mutants.
Mp5g11060 MpBELL5 experimental background BELL-like homeobox transcription factor; upregulated DEG in swi3a/boe-male mutants.
Mp3g11900 MpBHLH21 experimental background bHLH transcription factor; downregulated DEG in swi3a/boe-male mutants.
Mp2g07150 MpBHLH29 experimental background bHLH transcription factor; downregulated DEG in swi3a/boe-male mutants.
Mp2g07130 MpBHLH30 experimental background bHLH transcription factor; downregulated DEG in swi3a/boe-male mutants.
Mp2g07110 MpBHLH31 experimental background bHLH transcription factor; downregulated DEG in swi3a/boe-male mutants.
Mp3g23300 MpBNB experimental background Gametangiophore-initiation regulator; strongly upregulated DEG in swi3a/boe-male mutants in this paper's RNA-seq.
Mp2g02750 MpCKI1 experimental background Cytokinin-independent 1 histidine kinase; downregulated DEG in swi3a/boe-male mutants.
MpCPS missing experimental background ent-copalyl diphosphate synthase (gibberellin/diterpenoid pathway); downregulated DEG in swi3a/boe-male mutants.
Mp1g13010 MpDUO1 experimental background R2R3-MYB regulator of sperm differentiation; upregulated DEG in swi3a/boe-male mutants.
Mp3g17000 MpGLID experimental background Germline identity determinant; strongly upregulated DEG in swi3a/boe-male mutants.
Mp2g04930 MpKAI2B experimental background KARRIKIN INSENSITIVE 2 paralog linked to asexual reproduction; strongly upregulated DEG in swi3a/boe-male mutants.
Mp5g01600 MpKNOX1 experimental background KNOTTED-like homeobox gene; downregulated DEG in swi3a/boe-male mutants.
Mp2g01950 MpKOL2 experimental background ent-kaurene oxidase-like P450 (gibberellin/diterpenoid pathway); downregulated DEG in mutants.
Mp2g01940 MpKOL3 experimental background ent-kaurene oxidase-like P450 (gibberellin/diterpenoid pathway); downregulated DEG in mutants.
Mp6g03110 MpLEA-like44 experimental background Late embryogenesis abundant-like gene; strongly upregulated DEG in swi3a/boe-male mutants.
Mp6g03120 MpLEA-like45 experimental background Late embryogenesis abundant-like gene; strongly upregulated DEG in swi3a/boe-male mutants.
Mp2g20695 MpLRL citation background LRL/DROP bHLH partner that heterodimerizes with MpBNB; cited from prior work.
Mp2g16090 MpPHY citation background Phytochrome mediating FR-light perception in the vegetative-to-reproductive transition; cited from prior work.
Mp3g17350 MpPIF experimental background Phytochrome-interacting factor; downregulated DEG in swi3a/boe-male mutants.
MpPKAR missing experimental background Protein Kinase A regulatory subunit linked to sperm flagella formation/motility; upregulated DEG in mutants.
Mp2g04160 MpSETA experimental background bHLH transcription factor; downregulated DEG in swi3a/boe-male mutants.