Mp2g16090



Description

Annotation

Database ID Description
SMART SM00091 pas_2
SMART SM00065 gaf_1
FunFam G3DSA:3.30.450.270:FF:000001 Phytochrome
NCBIfam TIGR00229 PAS domain S-box protein
SUPERFAMILY SSF55781 GAF domain-like
ProSiteProfiles PS50109 Histidine kinase domain profile.
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
FunFam G3DSA:3.30.450.20:FF:000034 Phytochrome
ProSiteProfiles PS50112 PAS repeat profile.
Gene3D G3DSA:3.30.450.40 -
PANTHER PTHR47876 OS08G0260000 PROTEIN
Pfam PF00989 PAS fold
CDD cd16932 HATPase_Phy-like
CDD cd00130 PAS
Pfam PF00360 Phytochrome region
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
Pfam PF00512 His Kinase A (phospho-acceptor) domain
CDD cd00082 HisKA
Gene3D G3DSA:1.10.287.130 -
Gene3D G3DSA:3.30.450.20 PAS domain
Pfam PF08446 PAS fold
PIRSF PIRSF000084 Phytochrome_conventional
ProSiteProfiles PS50046 Phytochrome chromophore attachment site domain profile.
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Pfam PF01590 GAF domain
SMART SM00387 HKATPase_4
Gene3D G3DSA:3.30.565.10 -
Gene3D G3DSA:3.30.450.270 -
FunFam G3DSA:3.30.450.20:FF:000039 Phytochrome
PRINTS PR01033 Phytochrome signature
ProSiteProfiles PS50113 PAC domain profile.
SMART SM00388 HisKA_10
ProSitePatterns PS00245 Phytochrome chromophore attachment site signature.
KEGG K12121 phytochrome B
KOG KOG0519 Sensory transduction histidine kinase; N-term missing; C-term missing; [T]
MapolyID Mapoly0122s0054 -
GO GO:0009585 red, far-red light phototransduction
GO GO:0000155 phosphorelay sensor kinase activity
GO GO:0005515 protein binding
GO GO:0009881 photoreceptor activity
GO GO:0042803 protein homodimerization activity
GO GO:0009584 detection of visible light
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0007165 signal transduction
GO GO:0017006 protein-tetrapyrrole linkage

Nomenclature

Gene symbol Product Transcript ID Status
MpPHY Red light/Far-red light receptor PHYTOCHROME Published

Associated Literature (AI-based literature mining, Beta-version)

The single Marchantia polymorpha phytochrome (Mp-phy/MpPHY) was tested by yeast two-hybrid and in vitro binding assays. Mp-phy interacted with Mp-PIF in a red-light-dependent manner and with Arabidopsis PIF3, with its output module (Mp-phyOPM) mediating the APA-dependent interaction, demonstrating evolutionary conservation of the phy-APA interaction.

7 core 9 peripheral

Roetzer J, Asper B, Meir Z, Edelbacher N, Merai Z, Datta S, Dolan L. (2026) · Current biology : CB  research experimental subject
Red-light receptor phytochrome; loss-of-function MpPHY mutations cause hyponasty, antagonizing MpPHOT-mediated blue-light responses.
Jeong J, Lee Y, Choi G. (2025) · Nature communications  research experimental subject
The single Marchantia polymorpha phytochrome (Mp-phy/MpPHY) was tested by yeast two-hybrid and in vitro binding assays. Mp-phy interacted with Mp-PIF in a red-light-dependent manner and with Arabidopsis PIF3, with its output module (Mp-phyOPM) mediating the APA-dependent interaction, demonstrating evolutionary conservation of the phy-APA interaction.
Pashkovskiy P, Voronkov A, Voloshin R, Vereshchagin M, Abramova A, Khalilova L, Ivanova T, Khudyakova A, Kreslavski VD, Allakhverdiev SI. (2025) · Plant physiology and biochemistry : PPB  research experimental subject
MpPHY is the sole phytochrome receptor in M. polymorpha. This study examined its role during de-etiolation under red/far-red light, finding it regulates photosynthetic gene expression and functions like PhyB under red-dominant light (promoting growth) and like PhyA under far-red-dominant light (restricting photomorphogenesis).
Pashkovskiy, P., et al. (2023) · Plant Physiology and Biochemistry  research experimental subject
Phytochrome; its transcription is highly sensitive to red light within the far-red spectrum, linking light quality to photosynthesis/chloroplast morphology in M. polymorpha.
Inoue, K., et al. (2019a) · Plant and Cell Physiology  research experimental subject
Phytochrome; mediates the far-red high-irradiance response (FR-HIR) that induces reproductive (gametangiophore) development. Mpphy mutants analyzed.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16090.1 chr2:18418126..18424396 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.