Mp3g17350



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11445 bHLH_AtPIF_like
Coils Coil Coil
Gene3D G3DSA:4.10.280.10 -
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
SMART SM00353 finulus
FunFam G3DSA:4.10.280.10:FF:000004 Basic helix-loop-helix transcription factor
Pfam PF00010 Helix-loop-helix DNA-binding domain
PANTHER PTHR46807 TRANSCRIPTION FACTOR PIF3
KEGG K12126 phytochrome-interacting factor 3
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID Mapoly0039s0059 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH6 transcription factor, bHLH Published
MpPIF phytochrome interacting bHLH transcription factor, PIF Published

Associated Literature (AI-based literature mining, Beta-version)

The Marchantia polymorpha PHYTOCHROME-INTERACTING FACTOR (Mp-PIF/MpPIF) was shown by yeast two-hybrid assays to bind Mp-phy and Arabidopsis phyA/phyB output modules under red light via its APA motif; the mutated Mp-PIFmAPA lost interaction, supporting a conserved phy-APA binding mechanism.

6 core 14 peripheral

Jeong J, Lee Y, Choi G. (2025) · Nature communications  research experimental subject
The Marchantia polymorpha PHYTOCHROME-INTERACTING FACTOR (Mp-PIF/MpPIF) was shown by yeast two-hybrid assays to bind Mp-phy and Arabidopsis phyA/phyB output modules under red light via its APA motif; the mutated Mp-PIFmAPA lost interaction, supporting a conserved phy-APA binding mechanism.
Song M, Wang Y, Ma T, Terzaghi W, He K, Wang H, Xu B, Jing Y, Lin R, Deng XW, Zhu D, Wang Y. (2025) · Nucleic acids research  research experimental subject
Marchantia PIF transcription factor shown by Y2H to interact with MpPLL1 and MpPLL2, supporting conserved partnership of liverwort PKL homologs with this TF.
Streubel, S., et al. (2023) · Current Biology  research experimental subject
PIF transcription factor; integrates light-quality signals to regulate Mpo-MR-13 and meristem dormancy, acting antagonistically with MpPHY.
Sun, R., et al. (2023) · Plant Cell  research experimental subject
Knockout Mp_pifko analyzed by transcriptome; encodes a PIF transcription factor. FR-induced up-regulation of biosynthesis genes (e.g. MpKOL1) occurred only in wild-type and not Mp_pifko, showing MpPIF mediates FR responses.
Inoue, K., et al. (2019a) · Plant and Cell Physiology  research experimental subject
Single PHYTOCHROME INTERACTING FACTOR; knockout completely abolishes the FR-HIR reproductive induction.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g17350.1 chr3:18349029..18354627 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g17350.2 chr3:18349029..18354626 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.