Mp2g16560



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00072 Response regulator receiver domain
PANTHER PTHR43874 TWO-COMPONENT RESPONSE REGULATOR
Gene3D G3DSA:3.40.50.2300 -
SMART SM00448 REC_2
ProSiteProfiles PS50110 Response regulatory domain profile.
Pfam PF06203 CCT motif
ProSiteProfiles PS51017 CCT domain profile.
SUPERFAMILY SSF52172 CheY-like
KEGG K12129 pseudo-response regulator 7
KOG KOG0519 Sensory transduction histidine kinase; N-term missing; [T]
KOG KOG3080 Nucleolar protein-like/EBNA1-binding protein; N-term missing; [A]
MapolyID Mapoly0122s0007 -
GO GO:0005515 protein binding
GO GO:0009736 cytokinin-activated signaling pathway
GO GO:0000160 phosphorelay signal transduction system

Nomenclature

Gene symbol Product Transcript ID Status
MpPRR PRR3/7 Published

Associated Literature (AI-based literature mining, Beta-version)

PRR-family gene clustering with the AtPRR3/7 clade; shows the strongest circadian transcriptional oscillation under day/night and constant light. Negatively regulated by MpTOC1 and positively by MpRVE; knockout disrupts bioluminescence patterning. Strongly expressed in meristematic and apical regions.

3 core 2 peripheral

Kanesaka, Y., et al. (2023) · Frontiers in Plant Science  research experimental subject
CRISPR/Cas9 knockout mutant generated; its promoter also drove a luciferase reporter for monitoring clock rhythms. Mutation caused no significant change in gametangiophore formation timing under tested daylengths.
Lagerkrantz, U., et al. (2020) · Scientific Reports  research experimental subject
Knockout mutant (Mpprrko) loses rhythmic thallus movement in continuous light and shows arrhythmic clock gene expression. Forms part of a core transcriptional feedback loop; repressed by MpTOC1 and activated by MpRVE.
Linde, A.-M., et al. (2017) · New Phytologist  research experimental subject
PRR-family gene clustering with the AtPRR3/7 clade; shows the strongest circadian transcriptional oscillation under day/night and constant light. Negatively regulated by MpTOC1 and positively by MpRVE; knockout disrupts bioluminescence patterning. Strongly expressed in meristematic and apical regions.
Lagercrantz, U., et al. (2021) · New Phytologist  research experimental comparator
Pseudo-response regulator; core clock gene.
Mecchia, M. A., et al. (2021) · Current Biology  research experimental background
Pseudo-response regulator referenced; MpPRR promoter used.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16560.1 chr2:18781661..18787922 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g16560.2 chr2:18781770..18787922 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.