Mp2g20695



Description

Annotation

Database ID Description
Gene3D G3DSA:4.10.280.10 -
SMART SM00353 finulus
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:4.10.280.10:FF:000044 Basic helix-loop-helix transcription factor
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
Pfam PF00010 Helix-loop-helix DNA-binding domain
PANTHER PTHR16223 TRANSCRIPTION FACTOR BHLH83-RELATED
CDD cd11393 bHLH_AtbHLH_like
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
KOG KOG1319 bHLHZip transcription factor BIGMAX; C-term missing; [K]
MapolyID Mapoly0502s0001, Mapoly0502s0001 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH43 transcription factor, bHLH Published
MpLRL LRL class bHLH Published

Associated Literature (AI-based literature mining, Beta-version)

Inducible amiRNA knockdown and SRDX repression reduced MpLRL activity; severe lines lacked rhizoids and showed rhizoid-less dorsal callus in gemmae. Highest mRNA was detected in the meristematic notch by in situ hybridization. Authors conclude MpLRL positively regulates rhizoid development and acts as a general growth regulator required for dorsal gemma development.

3 core 6 peripheral

Alisha A, Jarmolowski A, Szweykowska-Kulinska Z, Sierocka I. (2026) · The Plant journal : for cell and molecular biology  research experimental subject
MpLRL (LJRHL-LIKE), which stabilizes MpBNB, was significantly downregulated in Mpspl3 knockout mutants by qPCR in this study.
Saito, M., et al. (2023) · Current Biology  research experimental subject
LRL (LOTUS JAPONICUS ROOTHAIRLESS-LIKE) bHLH TF; required for gametangium initial cell differentiation; heterodimerizes with MpBNB to control germ cell differentiation.
Breuninger, H., et al. (2016) · Current Biology  research experimental subject
Inducible amiRNA knockdown and SRDX repression reduced MpLRL activity; severe lines lacked rhizoids and showed rhizoid-less dorsal callus in gemmae. Highest mRNA was detected in the meristematic notch by in situ hybridization. Authors conclude MpLRL positively regulates rhizoid development and acts as a general growth regulator required for dorsal gemma development.
Lozano-Quiles M, Raval PK, Rensing SA, Gould SB. (2026) · Plant Reproduction  research citation background
LRL/DROP bHLH partner that heterodimerizes with MpBNB; cited from prior work.
Ren, X., et al. (2024) · Plant Cell  research citation background
Cited alongside CKI1 as securing specific, stable expression of MpBNB.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g20695.1 chr2:25273627..25280156 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.