Mp3g14390



Description

Annotation

Database ID Description
SMART SM00526 h15plus2
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR11467 HISTONE H1
Gene3D G3DSA:1.10.10.10 -
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
ProSiteProfiles PS51504 Linker histone H1/H5 globular (H15) domain profile.
Pfam PF00538 linker histone H1 and H5 family
CDD cd00073 H15
KOG KOG4012 Histone H1; C-term missing; [B]
MapolyID Mapoly0004s0232 -
GO GO:0006334 nucleosome assembly
GO GO:0005634 nucleus
GO GO:0045910 negative regulation of DNA recombination
GO GO:0003690 double-stranded DNA binding
GO GO:0030261 chromosome condensation
GO GO:0031492 nucleosomal DNA binding
GO GO:0000786 nucleosome
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPRM protamine-like protein Published

Associated Literature (AI-based literature mining, Beta-version)

MpPRM protamine-like genes are the primary subject, identified from the male gametogenesis transcriptome and characterized by ETD mass spectrometry. The paper shows three H1-related protamine-like precursors are post-translationally cleaved and C-terminally di-aminopropanelated to form mature sperm protamines, expressed mainly in antheridiophores.

3 core 3 peripheral

D'Ippolito, R. A., et al. (2019) · Journal of Biological Chemisty  research experimental subject
MpPRM protamine-like genes are the primary subject, identified from the male gametogenesis transcriptome and characterized by ETD mass spectrometry. The paper shows three H1-related protamine-like precursors are post-translationally cleaved and C-terminally di-aminopropanelated to form mature sperm protamines, expressed mainly in antheridiophores.
Higo, A., et al. (2018) · Nature Communications  research experimental subject
PROTAMINE-LIKE gene encoding an arginine-rich nuclear protein under MpDUO1 control, illustrating rewiring of the downstream network and replacing histone variants seen in flowering plants.
Higo, A., et al. (2016) · Plant and Cell Physiology  research experimental subject
MpPROTAMINE-LIKE; sperm chromatin protein with an arginine-rich C-terminus, identified in a transcriptional framework of male gametogenesis (spermiogenesis) in M. polymorpha.
Wang, M., et al. (2024a) · Communications Biology  research experimental tool
Late-spermiogenesis sperm-specific marker; significantly repressed in Mppgdh mutants in the qRT-PCR sperm-differentiation panel, used as a readout of impaired sperm development.
Iwasaki, M., et al. (2021a) · Current Biology  research experimental tool
Male-specifically expressed gene (Mp3g14390) used as a male marker in expression analyses.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g14390.1 chr3:14827634..14829081 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.