Mp7g16380



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.160.20 -
CDD cd19869 DSRM_DCL_plant
SUPERFAMILY SSF54768 dsRNA-binding domain-like
CDD cd00593 RIBOc
PANTHER PTHR14950 DICER-RELATED
Pfam PF00636 Ribonuclease III domain
FunFam G3DSA:1.10.1520.10:FF:000004 Endoribonuclease dicer-like 1
Gene3D G3DSA:1.10.1520.10 Ribonuclease III domain
SMART SM00358 DRBM_3
SUPERFAMILY SSF69065 RNase III domain-like
Pfam PF14709 double strand RNA binding domain from DEAD END PROTEIN 1
Hamap MF_00104 Ribonuclease 3 [rnc].
SMART SM00535 riboneu5
ProSiteProfiles PS50142 Ribonuclease III family domain profile.
ProSitePatterns PS00517 Ribonuclease III family signature.
ProSiteProfiles PS50137 Double stranded RNA-binding domain (dsRBD) profile.
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
Pfam PF00035 Double-stranded RNA binding motif
KOG KOG0701 dsRNA-specific nuclease Dicer and related ribonucleases; N-term missing; [A]
MapolyID Mapoly0123s0020 -
GO GO:0005634 nucleus
GO GO:0003723 RNA binding
GO GO:0006364 rRNA processing
GO GO:0006396 RNA processing
GO GO:0030422 siRNA processing
GO GO:0004525 ribonuclease III activity
GO GO:0005737 cytoplasm

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Ribonuclease III (rnc/DROSHA/RNT1); listed in Table 1 among MpKAN-responsive DEGs.

0 core 2 peripheral

Csicsely, E., et al. (2025) · The Plant Journal  research sequence comparator
Candidate DCL homolog of a possible new class; excluded (lacks PAZ domain).
Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Ribonuclease III (rnc/DROSHA/RNT1); listed in Table 1 among MpKAN-responsive DEGs.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g16380.1 chr7:20384236..20388449 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g16380.2 chr7:20383725..20388487 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.