Mp1g17210



Description

Annotation

Database ID Description
ProSiteProfiles PS50090 Myb-like domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF13921 Myb-like DNA-binding domain
CDD cd00167 SANT
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR45614 MYB PROTEIN-RELATED
FunFam G3DSA:1.10.10.60:FF:000010 Transcriptional activator Myb isoform A
SMART SM00717 sant
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 Homeodomain-like
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0001s0061 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB1 transcription factor, MYB Published
MpFGMYB FEMALE GAMETOPHYTE-SPECIFIC MYB Published

Associated Literature (AI-based literature mining, Beta-version)

A sex-determination pathway gene whose expression is suppressed in M. polymorpha males by a cis-acting antisense lncRNA. Examined here by RNA-seq expression analysis and phylogenetic reconstruction of FGMYB genes across green plants. Orthologs were detected in all studied Ricciaceae species, located on chromosome 5 in R. fluitans, indicating retention despite sex-chromosome turnover.

6 core 12 peripheral

Fu, Y., et al. (2025) · Journal of Integrative Plant Biology: doi: 10.1111/jipb.13867  research experimental subject
A sex-determination pathway gene whose expression is suppressed in M. polymorpha males by a cis-acting antisense lncRNA. Examined here by RNA-seq expression analysis and phylogenetic reconstruction of FGMYB genes across green plants. Orthologs were detected in all studied Ricciaceae species, located on chromosome 5 in R. fluitans, indicating retention despite sex-chromosome turnover.
Kajiwara, T., et al. (2024) · Plant & Cell Physiology  research experimental subject
Female-promoting R2R3-MYB gene that is the central target studied. fgmyb mutants show near-complete female-to-male sex conversion, and SUF transcription represses its sense-strand expression; FGMYB and SUF expression patterns were restored in complemented plants.
Cui, Y., et al. (2023) · Plant & Cell Physiology  research experimental subject
FEMALE GAMETOPHYTE MYB; master sexual-differentiation regulator. 3D morphological analysis shows germline-precursor patterning depends on MpFGMYB, underlying sexual dimorphism development.
Iwasaki, M., et al. (2021a) · Current Biology  research experimental subject
Autosomal sex-determining locus (FEMALE GAMETOPHYTE MYB) that promotes female differentiation and is positively regulated by BPCU. Its expression correlated with morphological sex, and fgmyb mutations suppressed the feminization induced by gBPCU.
Berger, F. (2019) · The EMBO Journal  research experimental subject
FEMALE GAMETOPHYTE MYB; an R2R3-MYB selectively expressed in female plants whose female-promoting function is controlled by an ancient antisense-RNA switch (SUF), driving sex determination in M. polymorpha.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17210.1 chr1:18026262..18033372 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.2 chr1:18026116..18033372 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.3 chr1:18026262..18032046 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.4 chr1:18026262..18032046 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.